Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PLCXD1-204ENST00000415337 579 ntAPPRIS ALT2 TSL 513.36□□□□□ -0.272e-6■■□□□ 13.9
RPS3P23396 CAD-209ENST00000487239 748 ntTSL 313.28□□□□□ -0.282e-6■■□□□ 13.9
RPS3P23396 CBL-205ENST00000637974 3030 ntAPPRIS ALT2 TSL 513.13□□□□□ -0.312e-6■■□□□ 13.9
RPS3P23396 AURKB-211ENST00000583915 397 ntTSL 212.94□□□□□ -0.342e-6■■□□□ 13.9
RPS3P23396 FAH-210ENST00000559542 782 ntTSL 312.64□□□□□ -0.392e-6■■□□□ 13.9
RPS3P23396 UBE2T-203ENST00000487227 885 ntTSL 312.64□□□□□ -0.392e-6■■□□□ 13.9
RPS3P23396 PSMD1-202ENST00000373635 3230 ntTSL 5 BASIC11.99□□□□□ -0.492e-6■■□□□ 13.9
RPS3P23396 INTS11-213ENST00000467408 639 ntTSL 211.79□□□□□ -0.522e-6■■□□□ 13.9
RPS3P23396 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.532e-6■■□□□ 13.9
RPS3P23396 CAD-204ENST00000456311 837 ntTSL 511.76□□□□□ -0.532e-6■■□□□ 13.9
RPS3P23396 NUP214-226ENST00000531600 1775 ntTSL 211.5□□□□□ -0.572e-8■■□□□ 13.9
RPS3P23396 PSMD1-201ENST00000308696 3326 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.582e-6■■□□□ 13.9
RPS3P23396 EIF4EBP1-202ENST00000520657 695 ntTSL 311.22□□□□□ -0.612e-6■■□□□ 13.9
RPS3P23396 INTS11-245ENST00000533916 405 ntTSL 211.04□□□□□ -0.642e-6■■□□□ 13.9
RPS3P23396 ACSS2-206ENST00000468550 547 ntTSL 511.03□□□□□ -0.642e-6■■□□□ 13.9
RPS3P23396 PSMD1-203ENST00000409643 2901 ntTSL 5 BASIC11.02□□□□□ -0.652e-6■■□□□ 13.9
RPS3P23396 INTS11-241ENST00000531292 704 ntTSL 211□□□□□ -0.652e-6■■□□□ 13.9
RPS3P23396 CBL-203ENST00000634586 3457 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.652e-6■■□□□ 13.9
RPS3P23396 INTS11-212ENST00000462432 2863 ntTSL 1 (best)10.96□□□□□ -0.662e-6■■□□□ 13.9
RPS3P23396 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■□□□ 13.9
RPS3P23396 LRRC41-204ENST00000496156 892 ntTSL 510.88□□□□□ -0.672e-6■■□□□ 13.9
RPS3P23396 AURKB-212ENST00000584561 1010 ntTSL 310.77□□□□□ -0.692e-6■■□□□ 13.9
RPS3P23396 AURKB-209ENST00000582368 771 ntTSL 310.57□□□□□ -0.722e-6■■□□□ 13.9
RPS3P23396 AURKB-206ENST00000580390 740 ntTSL 510.38□□□□□ -0.752e-6■■□□□ 13.9
RPS3P23396 NUP214-220ENST00000529286 493 ntTSL 39.73□□□□□ -0.852e-8■■□□□ 13.9
RPS3P23396 PRRC1-205ENST00000512871 703 ntTSL 29.65□□□□□ -0.862e-6■■□□□ 13.9
RPS3P23396 CBL-202ENST00000634301 340 ntTSL 38.44□□□□□ -1.062e-6■■□□□ 13.9
RPS3P23396 AURKB-208ENST00000581511 742 ntTSL 57.73□□□□□ -1.172e-6■■□□□ 13.9
RPS3P23396 FAH-207ENST00000558627 842 ntTSL 57.73□□□□□ -1.172e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-211ENST00000465412 710 ntTSL 57.5□□□□□ -1.212e-6■■□□□ 13.9
RPS3P23396 ACSS2-204ENST00000464399 358 ntTSL 56.84□□□□□ -1.312e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.34□□□□□ -1.392e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.01□□□□□ -1.452e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-212ENST00000469553 2103 ntTSL 1 (best)5.74□□□□□ -1.492e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.65□□□□□ -1.512e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.24□□□□□ -1.572e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.88□□□□□ -1.632e-6■■□□□ 13.9
RPS3P23396 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.672e-6■■□□□ 13.9
RPS3P23396 DAP3-207ENST00000463295 607 ntTSL 53.8□□□□□ -1.82e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.77□□□□□ -1.812e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-220ENST00000529145 722 ntTSL 43.17□□□□□ -1.92e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.96□□□□□ -1.942e-6■■□□□ 13.9
RPS3P23396 FUBP1-201ENST00000294623 2201 ntTSL 1 (best)13.78□□□□□ -0.24e-10■■□□□ 13.9
RPS3P23396 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-10■■□□□ 13.9
RPS3P23396 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC11.62□□□□□ -0.554e-10■■□□□ 13.9
RPS3P23396 PRAME-211ENST00000476336 589 ntTSL 213.03□□□□□ -0.323e-32■■□□□ 13.9
RPS3P23396 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 212.26□□□□□ -0.453e-32■■□□□ 13.9
RPS3P23396 SLC5A6-207ENST00000428518 570 ntTSL 416.41■□□□□ 0.225e-8■■□□□ 13.9
RPS3P23396 SLC5A6-205ENST00000414408 741 ntTSL 514.9□□□□□ -0.025e-8■■□□□ 13.9
RPS3P23396 SLC5A6-209ENST00000432106 725 ntTSL 310.52□□□□□ -0.735e-8■■□□□ 13.9
RPS3P23396 OS9-209ENST00000547079 583 ntTSL 311.04□□□□□ -0.643e-7■■□□□ 13.9
RPS3P23396 BUD23-215ENST00000471215 3886 ntTSL 29.69□□□□□ -0.862e-6■■□□□ 13.9
RPS3P23396 CD53-204ENST00000476408 756 ntTSL 56.7□□□□□ -1.344e-7■■□□□ 13.9
RPS3P23396 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.424e-7■■□□□ 13.9
RPS3P23396 EIF3E-217ENST00000523646 544 ntTSL 21.45□□□□□ -2.181e-6■■□□□ 13.9
RPS3P23396 CMC1-201ENST00000334841 724 ntTSL 314.93□□□□□ -0.028e-8■■□□□ 13.9
RPS3P23396 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.89□□□□□ -0.198e-8■■□□□ 13.9
RPS3P23396 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.678e-8■■□□□ 13.9
RPS3P23396 CMC1-209ENST00000477739 3749 ntTSL 1 (best)9.32□□□□□ -0.928e-8■■□□□ 13.9
RPS3P23396 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.665e-8■■□□□ 13.9
RPS3P23396 COX7A2L-205ENST00000464443 895 ntTSL 317.91■□□□□ 0.465e-8■■□□□ 13.9
RPS3P23396 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.355e-8■■□□□ 13.9
RPS3P23396 COX7A2L-208ENST00000607768 614 ntTSL 38.89□□□□□ -0.995e-8■■□□□ 13.9
RPS3P23396 COX7A2L-204ENST00000463055 540 ntTSL 1 (best) BASIC8.02□□□□□ -1.134e-6■■□□□ 13.9
RPS3P23396 DDX5-213ENST00000579996 820 ntTSL 28.74□□□□□ -1.011e-7■■□□□ 13.9
RPS3P23396 EGFL7-206ENST00000492002 654 ntTSL 522.13■■□□□ 1.132e-6■■□□□ 13.9
RPS3P23396 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.712e-6■■□□□ 13.9
RPS3P23396 SUB1-210ENST00000511988 584 ntTSL 310.08□□□□□ -0.81e-18■■□□□ 13.9
RPS3P23396 TARS-210ENST00000508361 2481 ntTSL 29.43□□□□□ -0.94e-6■■□□□ 13.9
RPS3P23396 TARS-202ENST00000455217 2523 ntTSL 2 BASIC9.25□□□□□ -0.934e-6■■□□□ 13.9
RPS3P23396 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.944e-6■■□□□ 13.9
RPS3P23396 TARS-212ENST00000509731 2170 ntTSL 1 (best)8.66□□□□□ -1.024e-6■■□□□ 13.9
RPS3P23396 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.094e-6■■□□□ 13.9
RPS3P23396 TARS-209ENST00000507716 2475 ntTSL 27.88□□□□□ -1.154e-6■■□□□ 13.9
RPS3P23396 TARS-211ENST00000509410 782 ntTSL 33.48□□□□□ -1.854e-6■■□□□ 13.9
RPS3P23396 HM13-211ENST00000468559 675 ntTSL 512.28□□□□□ -0.447e-11■■□□□ 13.9
RPS3P23396 ALB-208ENST00000495173 445 ntTSL 35.97□□□□□ -1.451e-323■■□□□ 13.9
RPS3P23396 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.121e-6■■□□□ 13.9
RPS3P23396 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.291e-6■■□□□ 13.9
RPS3P23396 ELAVL1-204ENST00000596154 880 ntTSL 38.01□□□□□ -1.131e-6■■□□□ 13.9
RPS3P23396 LAMP2-204ENST00000486593 1069 ntTSL 58.41□□□□□ -1.061e-6■■□□□ 13.9
RPS3P23396 RACK1-204ENST00000502890 705 ntTSL 39.7□□□□□ -0.864e-11■■□□□ 13.9
RPS3P23396 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.411e-14■■□□□ 13.9
RPS3P23396 TMA7-203ENST00000479126 688 ntTSL 220.64■□□□□ 0.892e-6■■□□□ 13.9
RPS3P23396 RNH1-223ENST00000533592 2344 nt20.48■□□□□ 0.872e-6■■□□□ 13.9
RPS3P23396 TMA7-202ENST00000477624 619 ntTSL 1 (best)20.15■□□□□ 0.822e-6■■□□□ 13.9
RPS3P23396 SLC43A3-207ENST00000526125 554 ntTSL 519.18■□□□□ 0.662e-6■■□□□ 13.9
RPS3P23396 SLC43A3-219ENST00000530316 573 ntTSL 419.18■□□□□ 0.662e-6■■□□□ 13.9
RPS3P23396 SLC43A3-224ENST00000533245 589 ntTSL 519.18■□□□□ 0.662e-6■■□□□ 13.9
RPS3P23396 SLC43A3-213ENST00000529494 560 ntTSL 419.15■□□□□ 0.662e-6■■□□□ 13.9
RPS3P23396 SLC43A3-217ENST00000530005 1434 ntTSL 1 (best)18.82■□□□□ 0.62e-6■■□□□ 13.9
RPS3P23396 TIMM50-211ENST00000598125 577 ntTSL 318.57■□□□□ 0.562e-6■■□□□ 13.9
RPS3P23396 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-6■■□□□ 13.9
RPS3P23396 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.452e-6■■□□□ 13.9
RPS3P23396 USP14-207ENST00000581983 503 ntTSL 317.13■□□□□ 0.339e-12■■□□□ 13.9
RPS3P23396 TIMM50-204ENST00000595286 698 ntTSL 217.01■□□□□ 0.312e-6■■□□□ 13.9
RPS3P23396 MDC1-206ENST00000489540 1402 ntTSL 216.94■□□□□ 0.32e-6■■□□□ 13.9
RPS3P23396 SLC43A3-210ENST00000528187 648 ntTSL 516.37■□□□□ 0.212e-6■■□□□ 13.9
RPS3P23396 CDCA5-207ENST00000527430 692 ntTSL 316.2■□□□□ 0.182e-6■■□□□ 13.9
RPS3P23396 TIMM50-210ENST00000597782 456 ntTSL 516.15■□□□□ 0.182e-6■■□□□ 13.9
Retrieved 100 of 24,271 protein–RNA pairs in 223.7 ms