RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 NISCHQ9Y2I1 1504 aa23.91■■□□□ 1.42
SUB1-210ENST00000511988 ABCC9O60706 1549 aa21.41■■□□□ 1.02
SUB1-210ENST00000511988 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
SUB1-210ENST00000511988 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
SUB1-210ENST00000511988 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
SUB1-210ENST00000511988 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
SUB1-210ENST00000511988 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
SUB1-210ENST00000511988 RB1CC1Q8TDY2 1594 aa19.82■□□□□ 0.76
SUB1-210ENST00000511988 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
SUB1-210ENST00000511988 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
SUB1-210ENST00000511988 NACADO15069 1562 aa19.72■□□□□ 0.75
SUB1-210ENST00000511988 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
SUB1-210ENST00000511988 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
SUB1-210ENST00000511988 CECR2Q9BXF3 1484 aa19.37■□□□□ 0.69
SUB1-210ENST00000511988 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
SUB1-210ENST00000511988 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
SUB1-210ENST00000511988 SCRIBQ14160 1630 aa19.26■□□□□ 0.67
SUB1-210ENST00000511988 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
SUB1-210ENST00000511988 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
SUB1-210ENST00000511988 EIF4G1Q04637 1599 aaKnown RBP18.92■□□□□ 0.62
SUB1-210ENST00000511988 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
SUB1-210ENST00000511988 CUX2O14529 1486 aa18.8■□□□□ 0.6
SUB1-210ENST00000511988 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
SUB1-210ENST00000511988 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
SUB1-210ENST00000511988 SMARCA4P51532 1647 aa18.49■□□□□ 0.55
SUB1-210ENST00000511988 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
SUB1-210ENST00000511988 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
SUB1-210ENST00000511988 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.52
SUB1-210ENST00000511988 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
SUB1-210ENST00000511988 SMARCA2P51531 1590 aa18.28■□□□□ 0.52
SUB1-210ENST00000511988 WIZO95785 1651 aa18.25■□□□□ 0.51
SUB1-210ENST00000511988 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
SUB1-210ENST00000511988 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
SUB1-210ENST00000511988 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
SUB1-210ENST00000511988 TOP2AP11388 1531 aaKnown RBP18.14■□□□□ 0.49
SUB1-210ENST00000511988 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
SUB1-210ENST00000511988 BAZ1BQ9UIG0 1483 aaKnown RBP18.12■□□□□ 0.49
SUB1-210ENST00000511988 NESP48681 1621 aa18.09■□□□□ 0.49
SUB1-210ENST00000511988 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
SUB1-210ENST00000511988 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
SUB1-210ENST00000511988 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
SUB1-210ENST00000511988 KIF21AQ7Z4S6 1674 aa17.73■□□□□ 0.43
SUB1-210ENST00000511988 LAMC3Q9Y6N6 1575 aa17.69■□□□□ 0.42
SUB1-210ENST00000511988 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
SUB1-210ENST00000511988 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
SUB1-210ENST00000511988 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
SUB1-210ENST00000511988 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
SUB1-210ENST00000511988 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
SUB1-210ENST00000511988 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
SUB1-210ENST00000511988 CFTRP13569 1480 aa17.64■□□□□ 0.41
SUB1-210ENST00000511988 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
SUB1-210ENST00000511988 MRC2Q9UBG0 1479 aa17.6■□□□□ 0.41
SUB1-210ENST00000511988 WDR62O43379 1518 aa17.56■□□□□ 0.4
SUB1-210ENST00000511988 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
SUB1-210ENST00000511988 CYB5RLQ6IPT4 315 aa17.51■□□□□ 0.39
SUB1-210ENST00000511988 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
SUB1-210ENST00000511988 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
SUB1-210ENST00000511988 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
SUB1-210ENST00000511988 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
SUB1-210ENST00000511988 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
SUB1-210ENST00000511988 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
SUB1-210ENST00000511988 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
SUB1-210ENST00000511988 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
SUB1-210ENST00000511988 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
SUB1-210ENST00000511988 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
SUB1-210ENST00000511988 CUX1P39880 1505 aa17.26■□□□□ 0.35
SUB1-210ENST00000511988 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
SUB1-210ENST00000511988 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
SUB1-210ENST00000511988 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
SUB1-210ENST00000511988 ZNF608Q9ULD9 1512 aaPredicted RBP17.12■□□□□ 0.33
SUB1-210ENST00000511988 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
SUB1-210ENST00000511988 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
SUB1-210ENST00000511988 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
SUB1-210ENST00000511988 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
SUB1-210ENST00000511988 IFT140Q96RY7 1462 aa17■□□□□ 0.31
SUB1-210ENST00000511988 SOGA1O94964 1423 aa16.99■□□□□ 0.31
SUB1-210ENST00000511988 FBLN2P98095 1184 aa16.98■□□□□ 0.31
SUB1-210ENST00000511988 CHD1O14646 1710 aa16.97■□□□□ 0.31
SUB1-210ENST00000511988 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
SUB1-210ENST00000511988 EEA1Q15075 1411 aa16.96■□□□□ 0.31
SUB1-210ENST00000511988 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
SUB1-210ENST00000511988 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
SUB1-210ENST00000511988 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
SUB1-210ENST00000511988 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
SUB1-210ENST00000511988 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
SUB1-210ENST00000511988 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.29
SUB1-210ENST00000511988 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
SUB1-210ENST00000511988 RUSC2Q8N2Y8 1516 aa16.84■□□□□ 0.29
SUB1-210ENST00000511988 CUL7Q14999 1698 aa16.82■□□□□ 0.28
SUB1-210ENST00000511988 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
SUB1-210ENST00000511988 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
SUB1-210ENST00000511988 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
SUB1-210ENST00000511988 KIF21BO75037 1637 aa16.78■□□□□ 0.28
SUB1-210ENST00000511988 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.28
SUB1-210ENST00000511988 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
SUB1-210ENST00000511988 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
SUB1-210ENST00000511988 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
SUB1-210ENST00000511988 IGF1RP08069 1367 aa16.73■□□□□ 0.27
SUB1-210ENST00000511988 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
SUB1-210ENST00000511988 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms