RNA–Protein interactions for RNA: ENST00000478442.5

RABGAP1L-214, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1L, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-214ENST00000478442 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
RABGAP1L-214ENST00000478442 CHIC1Q5VXU3 224 aa27.33■■□□□ 1.97
RABGAP1L-214ENST00000478442 SENP3Q9H4L4 574 aaPredicted RBP24.04■■□□□ 1.44
RABGAP1L-214ENST00000478442 PHF23Q9BUL5 403 aaPredicted RBP23.97■■□□□ 1.43
RABGAP1L-214ENST00000478442 FOXD1Q16676 465 aa22.31■■□□□ 1.16
RABGAP1L-214ENST00000478442 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
RABGAP1L-214ENST00000478442 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
RABGAP1L-214ENST00000478442 ADRA2BP18089 450 aa21.2■□□□□ 0.98
RABGAP1L-214ENST00000478442 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
RABGAP1L-214ENST00000478442 MSH5O43196 834 aa20.73■□□□□ 0.91
RABGAP1L-214ENST00000478442 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
RABGAP1L-214ENST00000478442 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
RABGAP1L-214ENST00000478442 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
RABGAP1L-214ENST00000478442 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
RABGAP1L-214ENST00000478442 DMRT2Q9Y5R5 561 aa19.14■□□□□ 0.65
RABGAP1L-214ENST00000478442 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
RABGAP1L-214ENST00000478442 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
RABGAP1L-214ENST00000478442 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
RABGAP1L-214ENST00000478442 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
RABGAP1L-214ENST00000478442 KCNA4P22459 653 aa18.63■□□□□ 0.57
RABGAP1L-214ENST00000478442 NPM3O75607 178 aaKnown RBP18.54■□□□□ 0.56
RABGAP1L-214ENST00000478442 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
RABGAP1L-214ENST00000478442 DNAJC5BQ9UF47 199 aa18.11■□□□□ 0.49
RABGAP1L-214ENST00000478442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
RABGAP1L-214ENST00000478442 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
RABGAP1L-214ENST00000478442 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
RABGAP1L-214ENST00000478442 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
RABGAP1L-214ENST00000478442 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
RABGAP1L-214ENST00000478442 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
RABGAP1L-214ENST00000478442 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
RABGAP1L-214ENST00000478442 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
RABGAP1L-214ENST00000478442 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
RABGAP1L-214ENST00000478442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
RABGAP1L-214ENST00000478442 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
RABGAP1L-214ENST00000478442 ZBTB22O15209 634 aa17.13■□□□□ 0.33
RABGAP1L-214ENST00000478442 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
RABGAP1L-214ENST00000478442 APLP2Q06481 763 aa17.07■□□□□ 0.32
RABGAP1L-214ENST00000478442 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
RABGAP1L-214ENST00000478442 CAPN15O75808 1086 aa16.97■□□□□ 0.31
RABGAP1L-214ENST00000478442 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
RABGAP1L-214ENST00000478442 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
RABGAP1L-214ENST00000478442 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
RABGAP1L-214ENST00000478442 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
RABGAP1L-214ENST00000478442 DSG3P32926 999 aa16.75■□□□□ 0.27
RABGAP1L-214ENST00000478442 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
RABGAP1L-214ENST00000478442 ATF5Q9Y2D1 282 aaPredicted RBP16.67■□□□□ 0.26
RABGAP1L-214ENST00000478442 ABCB7O75027 752 aa16.6■□□□□ 0.25
RABGAP1L-214ENST00000478442 POLA2Q14181 598 aa16.48■□□□□ 0.23
RABGAP1L-214ENST00000478442 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
RABGAP1L-214ENST00000478442 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
RABGAP1L-214ENST00000478442 FBLN2P98095 1184 aa16.05■□□□□ 0.16
RABGAP1L-214ENST00000478442 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
RABGAP1L-214ENST00000478442 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
RABGAP1L-214ENST00000478442 OSCARQ8IYS5 282 aa15.94■□□□□ 0.14
RABGAP1L-214ENST00000478442 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
RABGAP1L-214ENST00000478442 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
RABGAP1L-214ENST00000478442 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
RABGAP1L-214ENST00000478442 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
RABGAP1L-214ENST00000478442 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
RABGAP1L-214ENST00000478442 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
RABGAP1L-214ENST00000478442 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
RABGAP1L-214ENST00000478442 ABCC9O60706 1549 aa15.5■□□□□ 0.07
RABGAP1L-214ENST00000478442 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
RABGAP1L-214ENST00000478442 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
RABGAP1L-214ENST00000478442 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
RABGAP1L-214ENST00000478442 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
RABGAP1L-214ENST00000478442 SPDYE1Q8NFV5 336 aaPredicted RBP15.36■□□□□ 0.05
RABGAP1L-214ENST00000478442 CLEC11AQ9Y240 323 aa15.27■□□□□ 0.04
RABGAP1L-214ENST00000478442 POTEHQ6S545 545 aa15.24■□□□□ 0.03
RABGAP1L-214ENST00000478442 FKBP8Q14318 412 aa15.22■□□□□ 0.03
RABGAP1L-214ENST00000478442 PROM2Q8N271 834 aa15.21■□□□□ 0.03
RABGAP1L-214ENST00000478442 FXR2P51116 673 aaKnown RBP eCLIP15.16■□□□□ 0.02
RABGAP1L-214ENST00000478442 PIP4P2Q8N4L2 257 aa15.15■□□□□ 0.02
RABGAP1L-214ENST00000478442 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
RABGAP1L-214ENST00000478442 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
RABGAP1L-214ENST00000478442 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
RABGAP1L-214ENST00000478442 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
RABGAP1L-214ENST00000478442 CREBZFQ9NS37 354 aa14.85□□□□□ -0.03
RABGAP1L-214ENST00000478442 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
RABGAP1L-214ENST00000478442 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
RABGAP1L-214ENST00000478442 HAX1O00165 279 aa14.75□□□□□ -0.05
RABGAP1L-214ENST00000478442 MIER1Q8N108 512 aa14.7□□□□□ -0.06
RABGAP1L-214ENST00000478442 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
RABGAP1L-214ENST00000478442 PLEKHG5O94827 1062 aa14.69□□□□□ -0.06
RABGAP1L-214ENST00000478442 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
RABGAP1L-214ENST00000478442 MNX1P50219 401 aaPredicted RBP14.66□□□□□ -0.06
RABGAP1L-214ENST00000478442 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
RABGAP1L-214ENST00000478442 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
RABGAP1L-214ENST00000478442 DNAJC5Q9H3Z4 198 aa14.64□□□□□ -0.07
RABGAP1L-214ENST00000478442 VASPP50552 380 aaPredicted RBP14.58□□□□□ -0.08
RABGAP1L-214ENST00000478442 CD44P16070 742 aaKnown RBP14.56□□□□□ -0.08
RABGAP1L-214ENST00000478442 EVX2Q03828 476 aa14.56□□□□□ -0.08
RABGAP1L-214ENST00000478442 ZBTB47Q9UFB7 747 aaPredicted RBP14.56□□□□□ -0.08
RABGAP1L-214ENST00000478442 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
RABGAP1L-214ENST00000478442 PAK3O75914 559 aaPredicted RBP14.46□□□□□ -0.09
RABGAP1L-214ENST00000478442 ZRANB1Q9UGI0 708 aa14.43□□□□□ -0.1
RABGAP1L-214ENST00000478442 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
RABGAP1L-214ENST00000478442 ZNF579Q8NAF0 562 aaKnown RBP14.39□□□□□ -0.11
RABGAP1L-214ENST00000478442 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
RABGAP1L-214ENST00000478442 NUBP1P53384 320 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms