RNA–Protein interactions for RNA: ENST00000486220.5

RABGAP1L-216, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1L, Length 772 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-216ENST00000486220 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
RABGAP1L-216ENST00000486220 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
RABGAP1L-216ENST00000486220 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
RABGAP1L-216ENST00000486220 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
RABGAP1L-216ENST00000486220 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
RABGAP1L-216ENST00000486220 FOXD1Q16676 465 aa21.49■■□□□ 1.03
RABGAP1L-216ENST00000486220 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
RABGAP1L-216ENST00000486220 ADRA2BP18089 450 aa20.83■□□□□ 0.93
RABGAP1L-216ENST00000486220 PIAS4Q8N2W9 510 aaPredicted RBP20.28■□□□□ 0.84
RABGAP1L-216ENST00000486220 MSH5O43196 834 aa19.64■□□□□ 0.73
RABGAP1L-216ENST00000486220 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
RABGAP1L-216ENST00000486220 KCNA4P22459 653 aa18.96■□□□□ 0.63
RABGAP1L-216ENST00000486220 MAPK8IP2Q13387 824 aaPredicted RBP18.91■□□□□ 0.62
RABGAP1L-216ENST00000486220 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
RABGAP1L-216ENST00000486220 NCBP3Q53F19 620 aaKnown RBP18.66■□□□□ 0.58
RABGAP1L-216ENST00000486220 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
RABGAP1L-216ENST00000486220 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
RABGAP1L-216ENST00000486220 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
RABGAP1L-216ENST00000486220 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
RABGAP1L-216ENST00000486220 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
RABGAP1L-216ENST00000486220 ABCC9O60706 1549 aa18.11■□□□□ 0.49
RABGAP1L-216ENST00000486220 HOXD11P31277 338 aaPredicted RBP18.09■□□□□ 0.49
RABGAP1L-216ENST00000486220 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
RABGAP1L-216ENST00000486220 POTEDQ86YR6 584 aa17.8■□□□□ 0.44
RABGAP1L-216ENST00000486220 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
RABGAP1L-216ENST00000486220 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
RABGAP1L-216ENST00000486220 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
RABGAP1L-216ENST00000486220 ZBTB22O15209 634 aa17.47■□□□□ 0.39
RABGAP1L-216ENST00000486220 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
RABGAP1L-216ENST00000486220 CSRNP3Q8WYN3 585 aa17.45■□□□□ 0.38
RABGAP1L-216ENST00000486220 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
RABGAP1L-216ENST00000486220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
RABGAP1L-216ENST00000486220 CCDC180Q9P1Z9 1646 aa17.23■□□□□ 0.35
RABGAP1L-216ENST00000486220 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
RABGAP1L-216ENST00000486220 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
RABGAP1L-216ENST00000486220 DNAJC5Q9H3Z4 198 aa16.91■□□□□ 0.3
RABGAP1L-216ENST00000486220 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
RABGAP1L-216ENST00000486220 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
RABGAP1L-216ENST00000486220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
RABGAP1L-216ENST00000486220 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
RABGAP1L-216ENST00000486220 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
RABGAP1L-216ENST00000486220 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
RABGAP1L-216ENST00000486220 C1QBPQ07021 282 aaKnown RBP16.64■□□□□ 0.25
RABGAP1L-216ENST00000486220 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
RABGAP1L-216ENST00000486220 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
RABGAP1L-216ENST00000486220 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
RABGAP1L-216ENST00000486220 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
RABGAP1L-216ENST00000486220 CAPN15O75808 1086 aa16.5■□□□□ 0.23
RABGAP1L-216ENST00000486220 APLP2Q06481 763 aa16.49■□□□□ 0.23
RABGAP1L-216ENST00000486220 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
RABGAP1L-216ENST00000486220 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
RABGAP1L-216ENST00000486220 NACADO15069 1562 aa16.43■□□□□ 0.22
RABGAP1L-216ENST00000486220 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
RABGAP1L-216ENST00000486220 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
RABGAP1L-216ENST00000486220 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
RABGAP1L-216ENST00000486220 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
RABGAP1L-216ENST00000486220 ABCB7O75027 752 aa16.26■□□□□ 0.19
RABGAP1L-216ENST00000486220 POLA2Q14181 598 aa16.21■□□□□ 0.19
RABGAP1L-216ENST00000486220 DSG3P32926 999 aa16.15■□□□□ 0.18
RABGAP1L-216ENST00000486220 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
RABGAP1L-216ENST00000486220 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
RABGAP1L-216ENST00000486220 SHROOM4Q9ULL8 1493 aa15.97■□□□□ 0.15
RABGAP1L-216ENST00000486220 CUX2O14529 1486 aa15.95■□□□□ 0.14
RABGAP1L-216ENST00000486220 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
RABGAP1L-216ENST00000486220 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
RABGAP1L-216ENST00000486220 FBLN2P98095 1184 aa15.84■□□□□ 0.13
RABGAP1L-216ENST00000486220 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
RABGAP1L-216ENST00000486220 FKBP8Q14318 412 aa15.78■□□□□ 0.12
RABGAP1L-216ENST00000486220 ZBTB12Q9Y330 459 aaPredicted RBP15.76■□□□□ 0.11
RABGAP1L-216ENST00000486220 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
RABGAP1L-216ENST00000486220 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
RABGAP1L-216ENST00000486220 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
RABGAP1L-216ENST00000486220 SPDYE4A6NLX3 237 aa15.6■□□□□ 0.09
RABGAP1L-216ENST00000486220 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
RABGAP1L-216ENST00000486220 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
RABGAP1L-216ENST00000486220 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
RABGAP1L-216ENST00000486220 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
RABGAP1L-216ENST00000486220 THOC2Q8NI27 1593 aaKnown RBP15.39■□□□□ 0.05
RABGAP1L-216ENST00000486220 SSUH2Q9Y2M2 353 aa15.32■□□□□ 0.04
RABGAP1L-216ENST00000486220 NESP48681 1621 aa15.29■□□□□ 0.04
RABGAP1L-216ENST00000486220 DCAF1Q9Y4B6 1507 aa15.29■□□□□ 0.04
RABGAP1L-216ENST00000486220 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.04
RABGAP1L-216ENST00000486220 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
RABGAP1L-216ENST00000486220 PROM2Q8N271 834 aa15.26■□□□□ 0.03
RABGAP1L-216ENST00000486220 SMARCA2P51531 1590 aa15.23■□□□□ 0.03
RABGAP1L-216ENST00000486220 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
RABGAP1L-216ENST00000486220 KIF21AQ7Z4S6 1674 aa15.17■□□□□ 0.02
RABGAP1L-216ENST00000486220 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
RABGAP1L-216ENST00000486220 NCAPD3P42695 1498 aa15.11■□□□□ 0.01
RABGAP1L-216ENST00000486220 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
RABGAP1L-216ENST00000486220 RIMBP3CA6NJZ7 1639 aa15.07■□□□□ 0
RABGAP1L-216ENST00000486220 RIMBP3BA6NNM3 1639 aa15.07■□□□□ 0
RABGAP1L-216ENST00000486220 RIMBP3Q9UFD9 1639 aa15.07■□□□□ 0
RABGAP1L-216ENST00000486220 FBXO3Q9UK99 471 aa15.04■□□□□ -0
RABGAP1L-216ENST00000486220 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
RABGAP1L-216ENST00000486220 CLEC11AQ9Y240 323 aa15.01□□□□□ -0.01
RABGAP1L-216ENST00000486220 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
RABGAP1L-216ENST00000486220 ATAD2BQ9ULI0 1458 aa14.99□□□□□ -0.01
RABGAP1L-216ENST00000486220 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
RABGAP1L-216ENST00000486220 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms