RNA–Protein interactions for RNA: ENST00000325589.9

RABGAP1L-202, Transcript of RAB GTPase activating protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1L, Length 1,880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1L-202ENST00000325589 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
RABGAP1L-202ENST00000325589 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
RABGAP1L-202ENST00000325589 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
RABGAP1L-202ENST00000325589 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
RABGAP1L-202ENST00000325589 FOXD1Q16676 465 aa17.43■□□□□ 0.38
RABGAP1L-202ENST00000325589 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
RABGAP1L-202ENST00000325589 MSH5O43196 834 aa16.36■□□□□ 0.21
RABGAP1L-202ENST00000325589 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
RABGAP1L-202ENST00000325589 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
RABGAP1L-202ENST00000325589 ADRA2BP18089 450 aa16.22■□□□□ 0.19
RABGAP1L-202ENST00000325589 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
RABGAP1L-202ENST00000325589 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
RABGAP1L-202ENST00000325589 DMRT2Q9Y5R5 561 aa14.89□□□□□ -0.03
RABGAP1L-202ENST00000325589 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
RABGAP1L-202ENST00000325589 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
RABGAP1L-202ENST00000325589 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
RABGAP1L-202ENST00000325589 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
RABGAP1L-202ENST00000325589 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.12
RABGAP1L-202ENST00000325589 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
RABGAP1L-202ENST00000325589 DCAF8L1A6NGE4 600 aa14.12□□□□□ -0.15
RABGAP1L-202ENST00000325589 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
RABGAP1L-202ENST00000325589 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
RABGAP1L-202ENST00000325589 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
RABGAP1L-202ENST00000325589 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
RABGAP1L-202ENST00000325589 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
RABGAP1L-202ENST00000325589 KCNA4P22459 653 aa13.63□□□□□ -0.23
RABGAP1L-202ENST00000325589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■■■■□ 20.1
RABGAP1L-202ENST00000325589 U3KPZ7 1027 aaPredicted RBP13.37□□□□□ -0.27
RABGAP1L-202ENST00000325589 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
RABGAP1L-202ENST00000325589 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
RABGAP1L-202ENST00000325589 CAPN15O75808 1086 aa13.08□□□□□ -0.32
RABGAP1L-202ENST00000325589 APLP2Q06481 763 aa13.08□□□□□ -0.32
RABGAP1L-202ENST00000325589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
RABGAP1L-202ENST00000325589 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
RABGAP1L-202ENST00000325589 DSG3P32926 999 aa13.05□□□□□ -0.32
RABGAP1L-202ENST00000325589 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
RABGAP1L-202ENST00000325589 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
RABGAP1L-202ENST00000325589 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.34
RABGAP1L-202ENST00000325589 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
RABGAP1L-202ENST00000325589 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
RABGAP1L-202ENST00000325589 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
RABGAP1L-202ENST00000325589 ABCB7O75027 752 aa12.74□□□□□ -0.37
RABGAP1L-202ENST00000325589 POLA2Q14181 598 aa12.55□□□□□ -0.4
RABGAP1L-202ENST00000325589 ZBTB22O15209 634 aa12.54□□□□□ -0.4
RABGAP1L-202ENST00000325589 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
RABGAP1L-202ENST00000325589 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
RABGAP1L-202ENST00000325589 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
RABGAP1L-202ENST00000325589 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
RABGAP1L-202ENST00000325589 POTEHQ6S545 545 aa12.41□□□□□ -0.42
RABGAP1L-202ENST00000325589 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
RABGAP1L-202ENST00000325589 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
RABGAP1L-202ENST00000325589 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
RABGAP1L-202ENST00000325589 FBLN2P98095 1184 aa12.08□□□□□ -0.48
RABGAP1L-202ENST00000325589 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
RABGAP1L-202ENST00000325589 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
RABGAP1L-202ENST00000325589 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
RABGAP1L-202ENST00000325589 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
RABGAP1L-202ENST00000325589 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
RABGAP1L-202ENST00000325589 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
RABGAP1L-202ENST00000325589 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
RABGAP1L-202ENST00000325589 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
RABGAP1L-202ENST00000325589 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
RABGAP1L-202ENST00000325589 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
RABGAP1L-202ENST00000325589 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
RABGAP1L-202ENST00000325589 EHMT2Q96KQ7 1210 aa11.79□□□□□ -0.52
RABGAP1L-202ENST00000325589 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
RABGAP1L-202ENST00000325589 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
RABGAP1L-202ENST00000325589 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
RABGAP1L-202ENST00000325589 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
RABGAP1L-202ENST00000325589 HAX1O00165 279 aa11.59□□□□□ -0.55
RABGAP1L-202ENST00000325589 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
RABGAP1L-202ENST00000325589 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
RABGAP1L-202ENST00000325589 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
RABGAP1L-202ENST00000325589 EVX2Q03828 476 aa11.44□□□□□ -0.58
RABGAP1L-202ENST00000325589 SPDYE4A6NLX3 237 aa11.42□□□□□ -0.58
RABGAP1L-202ENST00000325589 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
RABGAP1L-202ENST00000325589 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.59
RABGAP1L-202ENST00000325589 FARP1Q9Y4F1 1045 aaPredicted RBP11.34□□□□□ -0.59
RABGAP1L-202ENST00000325589 PROM2Q8N271 834 aa11.26□□□□□ -0.61
RABGAP1L-202ENST00000325589 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
RABGAP1L-202ENST00000325589 GABBR2O75899 941 aa11.23□□□□□ -0.61
RABGAP1L-202ENST00000325589 CD44P16070 742 aaKnown RBP11.23□□□□□ -0.61
RABGAP1L-202ENST00000325589 CLCN6P51797 869 aa11.21□□□□□ -0.62
RABGAP1L-202ENST00000325589 ZNF579Q8NAF0 562 aaKnown RBP11.13□□□□□ -0.63
RABGAP1L-202ENST00000325589 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
RABGAP1L-202ENST00000325589 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
RABGAP1L-202ENST00000325589 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
RABGAP1L-202ENST00000325589 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.64
RABGAP1L-202ENST00000325589 POTEIP0CG38 1075 aa11□□□□□ -0.65
RABGAP1L-202ENST00000325589 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
RABGAP1L-202ENST00000325589 LHX8Q68G74 356 aa10.92□□□□□ -0.66
RABGAP1L-202ENST00000325589 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
RABGAP1L-202ENST00000325589 PHF12Q96QT6 1004 aa10.91□□□□□ -0.66
RABGAP1L-202ENST00000325589 PLEKHG5O94827 1062 aa10.89□□□□□ -0.67
RABGAP1L-202ENST00000325589 FKBP8Q14318 412 aa10.86□□□□□ -0.67
RABGAP1L-202ENST00000325589 MIER1Q8N108 512 aa10.85□□□□□ -0.67
RABGAP1L-202ENST00000325589 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
RABGAP1L-202ENST00000325589 ZBTB47Q9UFB7 747 aaPredicted RBP10.79□□□□□ -0.68
RABGAP1L-202ENST00000325589 MS4A3Q96HJ5 214 aa10.78□□□□□ -0.68
RABGAP1L-202ENST00000325589 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms