RNA–Protein interactions for RNA: ENST00000512871.1

PRRC1-205, Transcript of proline rich coiled-coil 1, humanhuman

TSL 2

Gene PRRC1, Length 703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC1-205ENST00000512871 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
PRRC1-205ENST00000512871 CHIC1Q5VXU3 224 aa29.81■■■□□ 2.36
PRRC1-205ENST00000512871 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
PRRC1-205ENST00000512871 PHF23Q9BUL5 403 aaPredicted RBP26.42■■□□□ 1.82
PRRC1-205ENST00000512871 FOXD1Q16676 465 aa24.89■■□□□ 1.58
PRRC1-205ENST00000512871 NISCHQ9Y2I1 1504 aa24.81■■□□□ 1.56
PRRC1-205ENST00000512871 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
PRRC1-205ENST00000512871 PIAS4Q8N2W9 510 aaPredicted RBP23.4■■□□□ 1.34
PRRC1-205ENST00000512871 MSH5O43196 834 aa23.39■■□□□ 1.33
PRRC1-205ENST00000512871 ADRA2BP18089 450 aa23.27■■□□□ 1.32
PRRC1-205ENST00000512871 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
PRRC1-205ENST00000512871 POTEDQ86YR6 584 aa22.66■■□□□ 1.22
PRRC1-205ENST00000512871 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
PRRC1-205ENST00000512871 ABCC9O60706 1549 aa22.13■■□□□ 1.13
PRRC1-205ENST00000512871 SCAF1Q9H7N4 1312 aaKnown RBP21.42■■□□□ 1.02
PRRC1-205ENST00000512871 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
PRRC1-205ENST00000512871 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
PRRC1-205ENST00000512871 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
PRRC1-205ENST00000512871 NACADO15069 1562 aa21.01■□□□□ 0.95
PRRC1-205ENST00000512871 DCAF8L2P0C7V8 631 aa21■□□□□ 0.95
PRRC1-205ENST00000512871 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
PRRC1-205ENST00000512871 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
PRRC1-205ENST00000512871 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
PRRC1-205ENST00000512871 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
PRRC1-205ENST00000512871 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
PRRC1-205ENST00000512871 CNKSR2Q8WXI2 1034 aa20.56■□□□□ 0.88
PRRC1-205ENST00000512871 DCAF8L1A6NGE4 600 aa20.55■□□□□ 0.88
PRRC1-205ENST00000512871 DCAF1Q9Y4B6 1507 aa20.52■□□□□ 0.87
PRRC1-205ENST00000512871 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
PRRC1-205ENST00000512871 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
PRRC1-205ENST00000512871 HOXD11P31277 338 aaPredicted RBP20.41■□□□□ 0.86
PRRC1-205ENST00000512871 RNF216Q9NWF9 866 aaPredicted RBP20.33■□□□□ 0.85
PRRC1-205ENST00000512871 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
PRRC1-205ENST00000512871 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
PRRC1-205ENST00000512871 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
PRRC1-205ENST00000512871 CACNB1Q02641 598 aaPredicted RBP20.09■□□□□ 0.81
PRRC1-205ENST00000512871 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
PRRC1-205ENST00000512871 EIF4G1Q04637 1599 aaKnown RBP19.95■□□□□ 0.78
PRRC1-205ENST00000512871 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
PRRC1-205ENST00000512871 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
PRRC1-205ENST00000512871 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
PRRC1-205ENST00000512871 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
PRRC1-205ENST00000512871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.732e-7■□□□□ 10.7
PRRC1-205ENST00000512871 KCNA4P22459 653 aa19.5■□□□□ 0.71
PRRC1-205ENST00000512871 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
PRRC1-205ENST00000512871 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
PRRC1-205ENST00000512871 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
PRRC1-205ENST00000512871 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
PRRC1-205ENST00000512871 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.67
PRRC1-205ENST00000512871 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
PRRC1-205ENST00000512871 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
PRRC1-205ENST00000512871 ERCC6Q03468 1493 aa19.15■□□□□ 0.66
PRRC1-205ENST00000512871 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
PRRC1-205ENST00000512871 MROH2BQ7Z745 1585 aa19.09■□□□□ 0.65
PRRC1-205ENST00000512871 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
PRRC1-205ENST00000512871 CUX2O14529 1486 aa19.07■□□□□ 0.64
PRRC1-205ENST00000512871 NESP48681 1621 aa19■□□□□ 0.63
PRRC1-205ENST00000512871 DNAJC5Q9H3Z4 198 aa19■□□□□ 0.63
PRRC1-205ENST00000512871 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
PRRC1-205ENST00000512871 CAPN15O75808 1086 aa18.9■□□□□ 0.62
PRRC1-205ENST00000512871 PDS5BQ9NTI5 1447 aa18.89■□□□□ 0.61
PRRC1-205ENST00000512871 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
PRRC1-205ENST00000512871 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
PRRC1-205ENST00000512871 WIZO95785 1651 aa18.82■□□□□ 0.6
PRRC1-205ENST00000512871 SPINK5Q9NQ38 1064 aaPredicted RBP18.81■□□□□ 0.6
PRRC1-205ENST00000512871 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
PRRC1-205ENST00000512871 APLP2Q06481 763 aa18.75■□□□□ 0.59
PRRC1-205ENST00000512871 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
PRRC1-205ENST00000512871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.7■□□□□ 0.58
PRRC1-205ENST00000512871 HNRNPUL2Q1KMD3 747 aaKnown RBP18.7■□□□□ 0.58
PRRC1-205ENST00000512871 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
PRRC1-205ENST00000512871 MRC2Q9UBG0 1479 aa18.66■□□□□ 0.58
PRRC1-205ENST00000512871 TOP2AP11388 1531 aaKnown RBP18.64■□□□□ 0.58
PRRC1-205ENST00000512871 DSG3P32926 999 aa18.64■□□□□ 0.57
PRRC1-205ENST00000512871 CFTRP13569 1480 aa18.63■□□□□ 0.57
PRRC1-205ENST00000512871 CEP164Q9UPV0 1460 aa18.61■□□□□ 0.57
PRRC1-205ENST00000512871 TRHP20396 242 aaPredicted RBP18.61■□□□□ 0.57
PRRC1-205ENST00000512871 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
PRRC1-205ENST00000512871 WDR62O43379 1518 aa18.58■□□□□ 0.56
PRRC1-205ENST00000512871 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
PRRC1-205ENST00000512871 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
PRRC1-205ENST00000512871 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
PRRC1-205ENST00000512871 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.54
PRRC1-205ENST00000512871 ABCB7O75027 752 aa18.43■□□□□ 0.54
PRRC1-205ENST00000512871 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
PRRC1-205ENST00000512871 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
PRRC1-205ENST00000512871 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
PRRC1-205ENST00000512871 PRDM2Q13029 1718 aa18.27■□□□□ 0.52
PRRC1-205ENST00000512871 ABCC8Q09428 1581 aa18.27■□□□□ 0.52
PRRC1-205ENST00000512871 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
PRRC1-205ENST00000512871 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
PRRC1-205ENST00000512871 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
PRRC1-205ENST00000512871 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
PRRC1-205ENST00000512871 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
PRRC1-205ENST00000512871 ZNF608Q9ULD9 1512 aaPredicted RBP18.16■□□□□ 0.5
PRRC1-205ENST00000512871 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
PRRC1-205ENST00000512871 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
PRRC1-205ENST00000512871 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.485e-7■■■■■ 63.8
PRRC1-205ENST00000512871 POLA2Q14181 598 aa18.04■□□□□ 0.48
PRRC1-205ENST00000512871 SOGA1O94964 1423 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms