Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN1P18031 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PTPN1P18031 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPN1P18031 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 AC092183.1-201ENST00000469884 875 ntBASIC17.66■□□□□ 0.42
PTPN1P18031 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PTPN1P18031 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.66■□□□□ 0.42
PTPN1P18031 AC004835.2-201ENST00000603762 682 ntBASIC17.66■□□□□ 0.42
PTPN1P18031 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPN1P18031 AC006538.1-201ENST00000567905 1585 ntBASIC17.66■□□□□ 0.42
PTPN1P18031 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN1P18031 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 AL592309.1-201ENST00000443127 649 ntBASIC17.65■□□□□ 0.42
PTPN1P18031 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN1P18031 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN1P18031 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PTPN1P18031 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN1P18031 AC106886.4-201ENST00000623557 2502 ntBASIC17.65■□□□□ 0.42
PTPN1P18031 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN1P18031 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms