Protein–RNA interactions for Protein: P17787

CHRNB2, Neuronal acetylcholine receptor subunit beta-2, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB2P17787 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNB2P17787 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB2P17787 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.7■□□□□ 0.42
CHRNB2P17787 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNB2P17787 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHRNB2P17787 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CHRNB2P17787 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.7■□□□□ 0.42
CHRNB2P17787 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHRNB2P17787 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB2P17787 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CHRNB2P17787 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB2P17787 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 AL662844.1-201ENST00000546340 181 ntBASIC17.69■□□□□ 0.42
CHRNB2P17787 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.69■□□□□ 0.42
CHRNB2P17787 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB2P17787 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHRNB2P17787 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.69■□□□□ 0.42
CHRNB2P17787 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.69■□□□□ 0.42
CHRNB2P17787 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHRNB2P17787 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CHRNB2P17787 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNB2P17787 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 RNU1-129P-201ENST00000384064 167 ntBASIC17.68■□□□□ 0.42
CHRNB2P17787 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNB2P17787 TPM4P1-201ENST00000436100 807 ntBASIC17.68■□□□□ 0.42
CHRNB2P17787 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB2P17787 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.68■□□□□ 0.42
CHRNB2P17787 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 U1.21-201ENST00000580816 167 ntBASIC17.68■□□□□ 0.42
CHRNB2P17787 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.68■□□□□ 0.42
CHRNB2P17787 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.68■□□□□ 0.42
CHRNB2P17787 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.68■□□□□ 0.42
CHRNB2P17787 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.68■□□□□ 0.42
CHRNB2P17787 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHRNB2P17787 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 AL596087.1-201ENST00000400979 1969 ntBASIC17.68■□□□□ 0.42
CHRNB2P17787 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHRNB2P17787 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.67■□□□□ 0.42
CHRNB2P17787 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.67■□□□□ 0.42
CHRNB2P17787 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
CHRNB2P17787 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHRNB2P17787 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHRNB2P17787 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms