Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.58■□□□□ 0.4
RARAP10276 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.58■□□□□ 0.4
RARAP10276 AC105339.3-201ENST00000560043 636 ntBASIC17.58■□□□□ 0.4
RARAP10276 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.58■□□□□ 0.4
RARAP10276 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.58■□□□□ 0.4
RARAP10276 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RARAP10276 AC104692.2-201ENST00000603054 253 ntBASIC17.58■□□□□ 0.4
RARAP10276 AC013467.2-201ENST00000605472 835 ntBASIC17.58■□□□□ 0.4
RARAP10276 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.58■□□□□ 0.4
RARAP10276 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.4
RARAP10276 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARAP10276 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RARAP10276 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARAP10276 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARAP10276 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARAP10276 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.58■□□□□ 0.4
RARAP10276 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RARAP10276 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 AP002414.3-201ENST00000589352 1468 ntBASIC17.57■□□□□ 0.4
RARAP10276 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.57■□□□□ 0.4
RARAP10276 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 KRT126P-201ENST00000549467 1181 ntBASIC17.57■□□□□ 0.4
RARAP10276 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.57■□□□□ 0.4
RARAP10276 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.57■□□□□ 0.4
RARAP10276 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RARAP10276 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RARAP10276 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RARAP10276 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 FAAHP1-202ENST00000446499 1238 ntBASIC17.56■□□□□ 0.4
RARAP10276 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.56■□□□□ 0.4
RARAP10276 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.56■□□□□ 0.4
RARAP10276 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.56■□□□□ 0.4
RARAP10276 AL356488.2-201ENST00000602755 427 ntBASIC17.56■□□□□ 0.4
RARAP10276 AC008667.4-201ENST00000607370 168 ntBASIC17.56■□□□□ 0.4
RARAP10276 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RARAP10276 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RARAP10276 AC132872.4-202ENST00000622924 2756 ntBASIC17.56■□□□□ 0.4
RARAP10276 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.56■□□□□ 0.4
RARAP10276 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.55■□□□□ 0.4
RARAP10276 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.55■□□□□ 0.4
RARAP10276 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms