Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.84■□□□□ 0.13
MT-ND1P03886 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MT-ND1P03886 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-ND1P03886 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-ND1P03886 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.83■□□□□ 0.13
MT-ND1P03886 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.83■□□□□ 0.13
MT-ND1P03886 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-ND1P03886 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND1P03886 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AL031133.1-201ENST00000406807 723 ntBASIC15.83■□□□□ 0.12
MT-ND1P03886 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
MT-ND1P03886 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
MT-ND1P03886 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND1P03886 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.83■□□□□ 0.12
MT-ND1P03886 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-ND1P03886 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 AC104640.1-201ENST00000562617 2109 ntBASIC15.83■□□□□ 0.12
MT-ND1P03886 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-ND1P03886 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-ND1P03886 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MT-ND1P03886 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND1P03886 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND1P03886 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-ND1P03886 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND1P03886 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MT-ND1P03886 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND1P03886 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 AL136379.1-201ENST00000623471 2642 ntBASIC15.82■□□□□ 0.12
MT-ND1P03886 NORAD-201ENST00000565493 5339 ntBASIC15.82■□□□□ 0.12
MT-ND1P03886 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
MT-ND1P03886 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 AC006538.1-201ENST00000567905 1585 ntBASIC15.82■□□□□ 0.12
MT-ND1P03886 PRAL-201ENST00000624952 3286 ntBASIC15.82■□□□□ 0.12
MT-ND1P03886 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-ND1P03886 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-ND1P03886 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-ND1P03886 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.82■□□□□ 0.12
MT-ND1P03886 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
MT-ND1P03886 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
MT-ND1P03886 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-ND1P03886 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-ND1P03886 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms