Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNCGO76070 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SNCGO76070 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SNCGO76070 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 AC092368.3-202ENST00000574180 1591 ntBASIC11.28□□□□□ -0.6
SNCGO76070 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 AC073347.1-201ENST00000421633 2643 ntBASIC11.28□□□□□ -0.6
SNCGO76070 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SNCGO76070 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 HSCB-202ENST00000398941 955 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 MCCD1P1-208ENST00000445732 328 ntBASIC11.28□□□□□ -0.6
SNCGO76070 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC11.28□□□□□ -0.6
SNCGO76070 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.28□□□□□ -0.6
SNCGO76070 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 AC011767.1-201ENST00000617410 1153 ntBASIC11.28□□□□□ -0.6
SNCGO76070 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SNCGO76070 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.28□□□□□ -0.6
SNCGO76070 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SNCGO76070 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SNCGO76070 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.27□□□□□ -0.6
SNCGO76070 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.27□□□□□ -0.6
SNCGO76070 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
SNCGO76070 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SNCGO76070 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.27□□□□□ -0.6
SNCGO76070 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SNCGO76070 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC11.27□□□□□ -0.61
SNCGO76070 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SNCGO76070 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC11.27□□□□□ -0.61
SNCGO76070 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC11.27□□□□□ -0.61
SNCGO76070 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.27□□□□□ -0.61
SNCGO76070 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.27□□□□□ -0.61
SNCGO76070 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SNCGO76070 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC11.27□□□□□ -0.61
SNCGO76070 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
SNCGO76070 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC11.27□□□□□ -0.61
SNCGO76070 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.27□□□□□ -0.61
SNCGO76070 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms