Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 EGFEM1P-202ENST00000431685 1563 ntBASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AL033527.5-201ENST00000641382 801 ntBASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AL033527.5-202ENST00000641632 1098 ntBASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 AC099548.2-209ENST00000480264 625 ntBASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 SDHAP3-202ENST00000515467 728 ntBASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 BTNL10-201ENST00000595971 695 ntBASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PTCH2Q9Y6C5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 BRWD1P1-201ENST00000401091 371 ntBASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 KRT43P-201ENST00000434019 910 ntBASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AC103810.3-201ENST00000583567 96 ntBASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 AC093525.8-201ENST00000624099 1342 ntBASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PTCH2Q9Y6C5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 KRT8P49-201ENST00000604166 1432 ntBASIC18.67■□□□□ 0.58
PTCH2Q9Y6C5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms