Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.4■□□□□ 0.06
PCDHGB1Q9Y5G3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.39■□□□□ 0.06
PCDHGB1Q9Y5G3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PCDHGB1Q9Y5G3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 AP005117.1-202ENST00000581724 1908 ntBASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 COX11P1-201ENST00000489116 835 ntBASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 AC010491.1-201ENST00000563101 2797 ntBASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGB1Q9Y5G3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 AL450487.1-201ENST00000426799 995 ntBASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 AC007967.3-201ENST00000434308 558 ntBASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 DUSP5P1-201ENST00000441325 1139 ntBASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGB1Q9Y5G3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGB1Q9Y5G3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms