Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
FNDC3AQ9Y2H6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
FNDC3AQ9Y2H6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
FNDC3AQ9Y2H6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 BCAR1-209ENST00000546196 1340 ntBASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
FNDC3AQ9Y2H6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 FAM8A3P-201ENST00000427218 844 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 KRT19P2-202ENST00000557173 1012 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 AC093028.1-201ENST00000622998 982 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 AL590787.1-201ENST00000568856 1315 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FNDC3AQ9Y2H6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 AC096734.2-201ENST00000562054 433 ntBASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms