Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 AJ011932.1-201ENST00000621707 465 ntBASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 LINC00895-201ENST00000629028 1637 ntBASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRIT1Q9P2V4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 FO538757.1-201ENST00000623083 1397 ntBASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 TREML5P-201ENST00000421694 576 ntBASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 IGHV3-42-201ENST00000520410 361 ntBASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRIT1Q9P2V4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AC105233.2-201ENST00000523697 349 ntBASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AF228730.5-201ENST00000530288 346 ntBASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 AL023806.1-201ENST00000603994 1649 ntBASIC16.12■□□□□ 0.17
LRIT1Q9P2V4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRIT1Q9P2V4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms