Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 AC034232.1-201ENST00000506026 1064 ntBASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 GCSHP2-201ENST00000560971 527 ntBASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HMG20AQ9NP66 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.27■□□□□ 0.04
HMG20AQ9NP66 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.27■□□□□ 0.04
HMG20AQ9NP66 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 AC104581.4-201ENST00000623126 3052 ntBASIC15.27■□□□□ 0.03
HMG20AQ9NP66 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HMG20AQ9NP66 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HMG20AQ9NP66 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms