Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 EIF4G2-219ENST00000531507 591 ntTSL 512.75□□□□□ -0.373e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-226ENST00000532570 573 ntTSL 512.39□□□□□ -0.433e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.823e-7■■□□□ 12.1
XRN2Q9H0D6 RNF213-219ENST00000574909 298 ntTSL 39.24□□□□□ -0.934e-6■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-206ENST00000525972 584 ntTSL 28.59□□□□□ -1.033e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.213e-7■■□□□ 12.1
XRN2Q9H0D6 EIF4G2-212ENST00000528562 601 ntTSL 46.93□□□□□ -1.33e-7■■□□□ 12.1
XRN2Q9H0D6 SH3BP2-228ENST00000515737 2579 ntTSL 217.88■□□□□ 0.452e-6■■□□□ 12.1
XRN2Q9H0D6 SLC2A8-210ENST00000477027 730 ntTSL 520.78■□□□□ 0.923e-9■■□□□ 12.1
XRN2Q9H0D6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.87■□□□□ 0.294e-6■■□□□ 12.1
XRN2Q9H0D6 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.61e-7■■□□□ 12.1
XRN2Q9H0D6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.069e-9■■□□□ 12.1
XRN2Q9H0D6 TOX3-203ENST00000563091 572 ntTSL 49.84□□□□□ -0.839e-9■■□□□ 12.1
XRN2Q9H0D6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.489e-9■■□□□ 12.1
XRN2Q9H0D6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.1■□□□□ 0.812e-8■■□□□ 12.1
XRN2Q9H0D6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.442e-8■■□□□ 12.1
XRN2Q9H0D6 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.19■□□□□ 0.022e-8■■□□□ 12.1
XRN2Q9H0D6 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.972e-8■■□□□ 12.1
XRN2Q9H0D6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.01■□□□□ 0.795e-6■■□□□ 12.1
XRN2Q9H0D6 CCND1-204ENST00000539241 920 ntTSL 216.97■□□□□ 0.315e-6■■□□□ 12.1
XRN2Q9H0D6 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.535e-6■■□□□ 12.1
XRN2Q9H0D6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.888e-12■■□□□ 12.1
XRN2Q9H0D6 FAM208B-205ENST00000473789 506 ntTSL 528.98■■■□□ 2.232e-6■■□□□ 12.1
XRN2Q9H0D6 FAM208B-206ENST00000477043 514 ntTSL 219.68■□□□□ 0.742e-6■■□□□ 12.1
XRN2Q9H0D6 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC14.44□□□□□ -0.13e-9■■□□□ 12.1
XRN2Q9H0D6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.025e-8■■□□□ 12.1
XRN2Q9H0D6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.015e-8■■□□□ 12.1
XRN2Q9H0D6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.065e-8■■□□□ 12.1
XRN2Q9H0D6 EPS8L2-208ENST00000526909 3844 ntTSL 511.97□□□□□ -0.495e-8■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC29.72■■■□□ 2.358e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.12■■□□□ 1.938e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-219ENST00000601336 754 ntTSL 222.3■■□□□ 1.168e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.02■□□□□ 0.318e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-214ENST00000599719 1473 ntTSL 1 (best)16.4■□□□□ 0.228e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.138e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-208ENST00000595196 3043 ntTSL 1 (best)15.73■□□□□ 0.118e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-218ENST00000601309 672 ntTSL 513.83□□□□□ -0.28e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.38e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.75□□□□□ -0.378e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-211ENST00000597725 573 ntTSL 412.25□□□□□ -0.458e-7■■□□□ 12.1
XRN2Q9H0D6 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC11.28□□□□□ -0.68e-7■■□□□ 12.1
XRN2Q9H0D6 SPPL2B-206ENST00000593243 551 ntTSL 418.42■□□□□ 0.542e-7■■□□□ 12.1
XRN2Q9H0D6 LAMB1-205ENST00000439976 703 ntTSL 520.09■□□□□ 0.812e-15■■□□□ 12.1
XRN2Q9H0D6 LAMB1-202ENST00000393559 550 ntTSL 215.98■□□□□ 0.152e-15■■□□□ 12.1
XRN2Q9H0D6 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.22e-15■■□□□ 12.1
XRN2Q9H0D6 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC11.2□□□□□ -0.622e-15■■□□□ 12.1
XRN2Q9H0D6 TOX3-205ENST00000568436 548 ntTSL 323.84■■□□□ 1.414e-10■■□□□ 12.1
XRN2Q9H0D6 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.23■□□□□ 0.194e-19■■□□□ 12.1
XRN2Q9H0D6 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)13.41□□□□□ -0.264e-19■■□□□ 12.1
XRN2Q9H0D6 DUXAP9-203ENST00000610585 903 ntTSL 312.94□□□□□ -0.344e-19■■□□□ 12.1
XRN2Q9H0D6 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)6.9□□□□□ -1.314e-19■■□□□ 12.1
XRN2Q9H0D6 EFNA1-205ENST00000497282 719 ntTSL 29.31□□□□□ -0.921e-6■■□□□ 12.1
XRN2Q9H0D6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.653e-6■■□□□ 12
XRN2Q9H0D6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.483e-6■■□□□ 12
XRN2Q9H0D6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.353e-6■■□□□ 12
XRN2Q9H0D6 DNM1-218ENST00000635859 100 ntTSL 520.14■□□□□ 0.816e-7■■□□□ 12
XRN2Q9H0D6 DNM1-205ENST00000463998 871 ntTSL 418.43■□□□□ 0.546e-7■■□□□ 12
XRN2Q9H0D6 RNF126-202ENST00000586749 2092 ntTSL 222.17■■□□□ 1.147e-7■■□□□ 12
XRN2Q9H0D6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.274e-11■■□□□ 12
XRN2Q9H0D6 SCAMP4-210ENST00000588555 1785 nt28.29■■■□□ 2.124e-11■■□□□ 12
XRN2Q9H0D6 NECAB3-207ENST00000478237 827 ntTSL 226.63■■□□□ 1.854e-11■■□□□ 12
XRN2Q9H0D6 NECAB3-212ENST00000485976 1016 ntTSL 526.63■■□□□ 1.854e-11■■□□□ 12
XRN2Q9H0D6 AC135050.2-202ENST00000532364 499 ntTSL 425.93■■□□□ 1.744e-11■■□□□ 12
XRN2Q9H0D6 C19orf54-205ENST00000596809 1104 ntTSL 525.75■■□□□ 1.715e-6■■□□□ 12
XRN2Q9H0D6 VARS-224ENST00000479051 612 ntTSL 323.78■■□□□ 1.49e-6■■□□□ 12
XRN2Q9H0D6 NECAB3-209ENST00000483813 1277 ntTSL 523.5■■□□□ 1.354e-11■■□□□ 12
XRN2Q9H0D6 PKM-217ENST00000566809 560 ntTSL 422.97■■□□□ 1.274e-11■■□□□ 12
XRN2Q9H0D6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.224e-11■■□□□ 12
XRN2Q9H0D6 PKM-218ENST00000567087 550 ntTSL 422.02■■□□□ 1.124e-11■■□□□ 12
XRN2Q9H0D6 PKM-223ENST00000569050 457 ntTSL 421.36■■□□□ 1.014e-11■■□□□ 12
XRN2Q9H0D6 PRSS53-203ENST00000492427 1782 ntTSL 321.09■□□□□ 0.974e-11■■□□□ 12
XRN2Q9H0D6 C19orf54-207ENST00000597507 947 ntTSL 220.48■□□□□ 0.875e-6■■□□□ 12
XRN2Q9H0D6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.864e-11■■□□□ 12
XRN2Q9H0D6 NECAB3-204ENST00000463246 766 ntTSL 320■□□□□ 0.794e-11■■□□□ 12
XRN2Q9H0D6 BANP-209ENST00000439677 736 ntTSL 519.6■□□□□ 0.734e-11■■□□□ 12
XRN2Q9H0D6 TNFRSF10B-203ENST00000518531 564 ntTSL 319.51■□□□□ 0.714e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.27■□□□□ 0.689e-6■■□□□ 12
XRN2Q9H0D6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.654e-11■■□□□ 12
XRN2Q9H0D6 CCDC85C-206ENST00000557576 656 ntTSL 219.06■□□□□ 0.649e-6■■□□□ 12
XRN2Q9H0D6 NECAB3-218ENST00000606525 2010 ntTSL 218.78■□□□□ 0.64e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.64■□□□□ 0.579e-6■■□□□ 12
XRN2Q9H0D6 DNAJB6-208ENST00000441561 1022 ntTSL 518.33■□□□□ 0.529e-6■■□□□ 12
XRN2Q9H0D6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.12■□□□□ 0.495e-6■■□□□ 12
XRN2Q9H0D6 TNFRSF12A-207ENST00000575836 161 ntTSL 317.85■□□□□ 0.453e-6■■□□□ 12
XRN2Q9H0D6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.63■□□□□ 0.415e-6■■□□□ 12
XRN2Q9H0D6 C19orf54-202ENST00000469741 1792 ntTSL 217.56■□□□□ 0.45e-6■■□□□ 12
XRN2Q9H0D6 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.374e-11■■□□□ 12
XRN2Q9H0D6 CTNNA1-236ENST00000522792 2044 ntTSL 216.64■□□□□ 0.254e-11■■□□□ 12
XRN2Q9H0D6 VARS-225ENST00000482996 728 ntTSL 316.44■□□□□ 0.229e-6■■□□□ 12
XRN2Q9H0D6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.224e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-214ENST00000486083 699 ntTSL 516.4■□□□□ 0.229e-6■■□□□ 12
XRN2Q9H0D6 AC135050.2-201ENST00000533518 2362 ntTSL 1 (best)16.24■□□□□ 0.194e-11■■□□□ 12
XRN2Q9H0D6 DUXAP10-210ENST00000624585 4667 ntTSL 215.55■□□□□ 0.084e-11■■□□□ 12
XRN2Q9H0D6 COASY-212ENST00000591583 716 ntTSL 215.47■□□□□ 0.074e-11■■□□□ 12
XRN2Q9H0D6 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.059e-6■■□□□ 12
XRN2Q9H0D6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.055e-6■■□□□ 12
XRN2Q9H0D6 PRSS53-202ENST00000486499 5489 ntTSL 215.23■□□□□ 0.034e-11■■□□□ 12
XRN2Q9H0D6 NECAB3-206ENST00000477778 462 ntTSL 314.95□□□□□ -0.024e-11■■□□□ 12
XRN2Q9H0D6 BANP-206ENST00000423252 644 ntTSL 514.91□□□□□ -0.024e-11■■□□□ 12
XRN2Q9H0D6 BANP-220ENST00000488074 759 ntTSL 314.86□□□□□ -0.034e-11■■□□□ 12
Retrieved 100 of 21,068 protein–RNA pairs in 122 ms