Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.11■□□□□ 0.17
UBE2E3Q969T4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 AC012569.1-201ENST00000591191 1524 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 CRYGEP-201ENST00000412192 528 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 VN2R19P-201ENST00000442399 1052 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 CXCL1P1-201ENST00000502804 216 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 RNA5SP419-201ENST00000515908 135 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 UNC93B6-202ENST00000528242 690 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 OR7E47P-204ENST00000575924 449 ntBASIC16.1■□□□□ 0.17
UBE2E3Q969T4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UBE2E3Q969T4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 AC009947.1-201ENST00000444350 727 ntBASIC16.09■□□□□ 0.17
UBE2E3Q969T4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 MIR4515-201ENST00000584082 81 ntBASIC16.09■□□□□ 0.17
UBE2E3Q969T4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 HLA-A-201ENST00000376802 1334 ntBASIC16.09■□□□□ 0.17
UBE2E3Q969T4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
UBE2E3Q969T4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
UBE2E3Q969T4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
UBE2E3Q969T4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.08■□□□□ 0.17
UBE2E3Q969T4 SNX33P1-201ENST00000592116 1762 ntBASIC16.08■□□□□ 0.17
UBE2E3Q969T4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.08■□□□□ 0.17
UBE2E3Q969T4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2E3Q969T4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
UBE2E3Q969T4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2E3Q969T4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2E3Q969T4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
UBE2E3Q969T4 AC009078.2-202ENST00000463353 338 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms