Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CNOT9Q92600 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CNOT9Q92600 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT9Q92600 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT9Q92600 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT9Q92600 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.46■□□□□ 0.07
CNOT9Q92600 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 AC107918.2-201ENST00000530817 355 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 MIR4492-201ENST00000581627 80 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 MPDU1-223ENST00000582151 728 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.46■□□□□ 0.07
CNOT9Q92600 AC104692.2-201ENST00000603054 253 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 AC008667.4-201ENST00000607370 168 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 FAM215A-202ENST00000632077 792 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT9Q92600 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 AL662844.4-201ENST00000606367 2838 ntBASIC15.46■□□□□ 0.07
CNOT9Q92600 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.46■□□□□ 0.07
CNOT9Q92600 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT9Q92600 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.06
CNOT9Q92600 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.46■□□□□ 0.06
CNOT9Q92600 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
CNOT9Q92600 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CNOT9Q92600 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CNOT9Q92600 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.45■□□□□ 0.06
CNOT9Q92600 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 PKD1P5-201ENST00000532415 10291 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CNOT9Q92600 PMS2P1-201ENST00000431037 1228 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 FAAHP1-202ENST00000446499 1238 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CNOT9Q92600 KRT126P-201ENST00000549467 1181 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 GGTLC5P-201ENST00000617623 998 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CNOT9Q92600 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
CNOT9Q92600 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CNOT9Q92600 ALOX12P2-203ENST00000570921 1945 ntBASIC15.45■□□□□ 0.06
CNOT9Q92600 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 SNX33P1-201ENST00000592116 1762 ntBASIC15.44■□□□□ 0.06
CNOT9Q92600 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT9Q92600 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CNOT9Q92600 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.44■□□□□ 0.06
CNOT9Q92600 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CNOT9Q92600 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CNOT9Q92600 HLA-J-202ENST00000469281 1241 ntBASIC15.44■□□□□ 0.06
CNOT9Q92600 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.44■□□□□ 0.06
CNOT9Q92600 IGHV3-65-201ENST00000523210 341 ntBASIC15.44■□□□□ 0.06
CNOT9Q92600 AP002469.2-201ENST00000531724 424 ntBASIC15.44■□□□□ 0.06
CNOT9Q92600 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT9Q92600 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.44■□□□□ 0.06
CNOT9Q92600 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms