Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BEST2Q8NFU1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.96■□□□□ 0.46
BEST2Q8NFU1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BEST2Q8NFU1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BEST2Q8NFU1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 AL592309.1-201ENST00000443127 649 ntBASIC17.95■□□□□ 0.46
BEST2Q8NFU1 KRT18P34-201ENST00000488218 1270 ntBASIC17.95■□□□□ 0.46
BEST2Q8NFU1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BEST2Q8NFU1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC012313.1-201ENST00000593393 3059 ntBASIC17.94■□□□□ 0.46
BEST2Q8NFU1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC005237.2-201ENST00000434368 219 ntBASIC17.94■□□□□ 0.46
BEST2Q8NFU1 HMGN1P19-201ENST00000436976 333 ntBASIC17.94■□□□□ 0.46
BEST2Q8NFU1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 IGHV3-62-201ENST00000520057 340 ntBASIC17.94■□□□□ 0.46
BEST2Q8NFU1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
BEST2Q8NFU1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.93■□□□□ 0.46
BEST2Q8NFU1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms