Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 RNF152P1-201ENST00000397754 604 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 TSPY5P-201ENST00000426936 936 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 KRT18P38-201ENST00000449496 1282 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 AC097493.4-201ENST00000641197 219 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 AC073508.3-201ENST00000619697 1419 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 AC010460.3-201ENST00000511359 1579 ntBASIC16.33■□□□□ 0.2
HIPK4Q8NE63 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIPK4Q8NE63 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 MIR600HG-201ENST00000449175 5984 ntBASIC16.32■□□□□ 0.2
HIPK4Q8NE63 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 EGFEM1P-202ENST00000431685 1563 ntBASIC16.32■□□□□ 0.2
HIPK4Q8NE63 AC112907.2-201ENST00000448639 330 ntBASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 VENTXP5-201ENST00000523979 775 ntBASIC16.32■□□□□ 0.2
HIPK4Q8NE63 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HIPK4Q8NE63 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 AC126177.1-201ENST00000547829 2218 ntBASIC16.31■□□□□ 0.2
HIPK4Q8NE63 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIPK4Q8NE63 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms