Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.99□□□□□ -0.01
SCN1BQ07699 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.99□□□□□ -0.01
SCN1BQ07699 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 GPR32P1-201ENST00000601788 811 ntBASIC14.99□□□□□ -0.01
SCN1BQ07699 AC006011.2-201ENST00000621313 1158 ntBASIC14.99□□□□□ -0.01
SCN1BQ07699 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.99□□□□□ -0.01
SCN1BQ07699 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.99□□□□□ -0.01
SCN1BQ07699 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SCN1BQ07699 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SCN1BQ07699 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 BX276092.7-203ENST00000637198 1536 ntBASIC14.98□□□□□ -0.01
SCN1BQ07699 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 HBZP1-201ENST00000354915 429 ntBASIC14.98□□□□□ -0.01
SCN1BQ07699 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.98□□□□□ -0.01
SCN1BQ07699 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.98□□□□□ -0.01
SCN1BQ07699 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.98□□□□□ -0.01
SCN1BQ07699 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.98□□□□□ -0.01
SCN1BQ07699 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
SCN1BQ07699 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SCN1BQ07699 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
SCN1BQ07699 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 MIR662-201ENST00000384847 95 ntBASIC14.97□□□□□ -0.01
SCN1BQ07699 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.97□□□□□ -0.01
SCN1BQ07699 AC104076.2-201ENST00000448912 469 ntBASIC14.97□□□□□ -0.01
SCN1BQ07699 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SCN1BQ07699 VENTXP5-201ENST00000523979 775 ntBASIC14.97□□□□□ -0.01
SCN1BQ07699 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms