Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 HDAC10-219ENST00000497483 578 ntTSL 222.6■■□□□ 1.218e-8■□□□□ 8.9
NCBP2P52298 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.928e-8■□□□□ 8.9
NCBP2P52298 WDR45B-203ENST00000571817 889 ntTSL 318.63■□□□□ 0.578e-8■□□□□ 8.9
NCBP2P52298 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.6■□□□□ 0.578e-8■□□□□ 8.9
NCBP2P52298 HDAC10-208ENST00000470965 810 ntTSL 518.45■□□□□ 0.548e-8■□□□□ 8.9
NCBP2P52298 MAPK12-209ENST00000497036 6248 ntTSL 218.29■□□□□ 0.528e-8■□□□□ 8.9
NCBP2P52298 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.498e-8■□□□□ 8.9
NCBP2P52298 HDAC10-214ENST00000483222 2091 ntTSL 517.63■□□□□ 0.418e-8■□□□□ 8.9
NCBP2P52298 HDAC10-221ENST00000498366 2153 ntTSL 517.49■□□□□ 0.398e-8■□□□□ 8.9
NCBP2P52298 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.328e-8■□□□□ 8.9
NCBP2P52298 CDC6-203ENST00000577249 541 ntTSL 416.98■□□□□ 0.318e-8■□□□□ 8.9
NCBP2P52298 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.288e-8■□□□□ 8.9
NCBP2P52298 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.58■□□□□ 0.248e-8■□□□□ 8.9
NCBP2P52298 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.248e-8■□□□□ 8.9
NCBP2P52298 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)16.33■□□□□ 0.28e-8■□□□□ 8.9
NCBP2P52298 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.27■□□□□ 0.28e-8■□□□□ 8.9
NCBP2P52298 HDAC10-216ENST00000489424 759 ntTSL 515.82■□□□□ 0.128e-8■□□□□ 8.9
NCBP2P52298 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.118e-8■□□□□ 8.9
NCBP2P52298 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.058e-8■□□□□ 8.9
NCBP2P52298 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.018e-8■□□□□ 8.9
NCBP2P52298 PRMT7-217ENST00000565983 588 ntTSL 414.74□□□□□ -0.058e-8■□□□□ 8.9
NCBP2P52298 RREB1-205ENST00000467782 243 ntTSL 514.63□□□□□ -0.078e-8■□□□□ 8.9
NCBP2P52298 WDR45B-208ENST00000574828 765 ntTSL 314.44□□□□□ -0.18e-8■□□□□ 8.9
NCBP2P52298 CDC6-204ENST00000580824 696 ntTSL 314.28□□□□□ -0.128e-8■□□□□ 8.9
NCBP2P52298 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.99□□□□□ -0.178e-8■□□□□ 8.9
NCBP2P52298 WDR45B-206ENST00000573616 896 ntTSL 512.73□□□□□ -0.378e-8■□□□□ 8.9
NCBP2P52298 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.448e-8■□□□□ 8.9
NCBP2P52298 RREB1-206ENST00000471433 1021 ntTSL 511.97□□□□□ -0.498e-8■□□□□ 8.9
NCBP2P52298 RREB1-209ENST00000491191 998 ntTSL 511.48□□□□□ -0.578e-8■□□□□ 8.9
NCBP2P52298 TEX2-206ENST00000583738 458 ntTSL 311.39□□□□□ -0.598e-8■□□□□ 8.9
NCBP2P52298 TEX2-208ENST00000584379 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.748e-8■□□□□ 8.9
NCBP2P52298 TEX2-201ENST00000258991 5232 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.88e-8■□□□□ 8.9
NCBP2P52298 RREB1-207ENST00000475946 9067 ntTSL 1 (best)8.15□□□□□ -1.18e-8■□□□□ 8.9
NCBP2P52298 TPRN-204ENST00000541945 130 ntTSL 41.29□□□□□ -2.28e-8■□□□□ 8.9
NCBP2P52298 STK16-212ENST00000496443 2094 ntTSL 219.16■□□□□ 0.668e-8■□□□□ 8.9
NCBP2P52298 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.568e-8■□□□□ 8.9
NCBP2P52298 STK16-213ENST00000496800 1243 ntTSL 218.36■□□□□ 0.538e-8■□□□□ 8.9
NCBP2P52298 STK16-208ENST00000475696 1513 ntTSL 217.73■□□□□ 0.438e-8■□□□□ 8.9
NCBP2P52298 STK16-207ENST00000475342 866 ntTSL 317.35■□□□□ 0.378e-8■□□□□ 8.9
NCBP2P52298 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.35□□□□□ -0.438e-8■□□□□ 8.9
NCBP2P52298 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.78e-8■□□□□ 8.9
NCBP2P52298 STK16-206ENST00000461417 545 ntTSL 27.04□□□□□ -1.288e-8■□□□□ 8.9
NCBP2P52298 STK16-211ENST00000491697 579 ntTSL 24.84□□□□□ -1.638e-8■□□□□ 8.9
NCBP2P52298 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.271e-18■□□□□ 8.9
NCBP2P52298 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.331e-18■□□□□ 8.9
NCBP2P52298 TGFBR3-203ENST00000417833 551 ntTSL 412.19□□□□□ -0.461e-18■□□□□ 8.9
NCBP2P52298 TGFBR3-211ENST00000533370 563 ntTSL 411.55□□□□□ -0.561e-18■□□□□ 8.9
NCBP2P52298 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.311e-18■□□□□ 8.9
NCBP2P52298 HSPH1-208ENST00000629751 1034 ntTSL 217.02■□□□□ 0.324e-8■□□□□ 8.9
NCBP2P52298 METTL22-201ENST00000163678 1510 ntTSL 1 (best)16.92■□□□□ 0.34e-8■□□□□ 8.9
NCBP2P52298 METTL22-209ENST00000563958 614 ntTSL 315.89■□□□□ 0.134e-8■□□□□ 8.9
NCBP2P52298 CFAP20-207ENST00000567660 731 ntTSL 215.31■□□□□ 0.044e-8■□□□□ 8.9
NCBP2P52298 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.054e-8■□□□□ 8.9
NCBP2P52298 CFAP20-205ENST00000565880 572 ntTSL 313.74□□□□□ -0.214e-8■□□□□ 8.9
NCBP2P52298 METTL22-215ENST00000567295 714 ntTSL 313.4□□□□□ -0.264e-8■□□□□ 8.9
NCBP2P52298 CFAP20-203ENST00000562622 1605 ntTSL 513.37□□□□□ -0.274e-8■□□□□ 8.9
NCBP2P52298 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.07□□□□□ -0.324e-8■□□□□ 8.9
NCBP2P52298 HSPH1-206ENST00000602786 3488 ntTSL 1 (best)13.07□□□□□ -0.324e-8■□□□□ 8.9
NCBP2P52298 METTL22-212ENST00000564554 550 ntTSL 413.04□□□□□ -0.324e-8■□□□□ 8.9
NCBP2P52298 BCL6-210ENST00000496823 1138 ntTSL 312.87□□□□□ -0.354e-8■□□□□ 8.9
NCBP2P52298 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.99□□□□□ -0.494e-8■□□□□ 8.9
NCBP2P52298 DESI1-201ENST00000263256 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.534e-8■□□□□ 8.9
NCBP2P52298 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.544e-8■□□□□ 8.9
NCBP2P52298 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.644e-8■□□□□ 8.9
NCBP2P52298 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC10.85□□□□□ -0.674e-8■□□□□ 8.9
NCBP2P52298 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.724e-8■□□□□ 8.9
NCBP2P52298 CFAP20-206ENST00000567092 710 ntTSL 210.51□□□□□ -0.734e-8■□□□□ 8.9
NCBP2P52298 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC9.8□□□□□ -0.844e-8■□□□□ 8.9
NCBP2P52298 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.014e-8■□□□□ 8.9
NCBP2P52298 BCL6-209ENST00000480458 342 ntTSL 57.76□□□□□ -1.174e-8■□□□□ 8.9
NCBP2P52298 BCL6-207ENST00000470319 526 ntTSL 41.94□□□□□ -2.14e-8■□□□□ 8.9
NCBP2P52298 SNAPC3-203ENST00000421710 730 ntTSL 523.04■■□□□ 1.282e-19■□□□□ 8.9
NCBP2P52298 SNAPC3-206ENST00000490969 2524 ntTSL 1 (best)17.96■□□□□ 0.472e-19■□□□□ 8.9
NCBP2P52298 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-19■□□□□ 8.9
NCBP2P52298 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.272e-19■□□□□ 8.9
NCBP2P52298 SNAPC3-205ENST00000467062 2574 ntTSL 1 (best)16.7■□□□□ 0.262e-19■□□□□ 8.9
NCBP2P52298 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.528e-8■□□□□ 8.9
NCBP2P52298 SLC30A10-201ENST00000356609 3650 ntTSL 1 (best)14.81□□□□□ -0.048e-8■□□□□ 8.9
NCBP2P52298 SLC30A10-204ENST00000484239 1902 ntTSL 27.5□□□□□ -1.218e-8■□□□□ 8.9
NCBP2P52298 SHANK3-202ENST00000414786 7394 ntTSL 518.26■□□□□ 0.516e-6■□□□□ 8.9
NCBP2P52298 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.486e-6■□□□□ 8.9
NCBP2P52298 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.16e-6■□□□□ 8.9
NCBP2P52298 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC11.16□□□□□ -0.623e-45■□□□□ 8.8
NCBP2P52298 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.934e-19■□□□□ 8.8
NCBP2P52298 CA5A-203ENST00000568801 506 ntTSL 29.08□□□□□ -0.964e-19■□□□□ 8.8
NCBP2P52298 LSM14B-202ENST00000279069 811 ntTSL 325.44■■□□□ 1.662e-9■□□□□ 8.8
NCBP2P52298 ZDHHC16-212ENST00000459777 834 ntTSL 324.09■■□□□ 1.452e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-208ENST00000414567 989 ntTSL 524.08■■□□□ 1.452e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-213ENST00000462924 1018 ntTSL 524.08■■□□□ 1.452e-6■□□□□ 8.8
NCBP2P52298 LSM14B-205ENST00000400318 1073 ntTSL 1 (best)23.95■■□□□ 1.422e-9■□□□□ 8.8
NCBP2P52298 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.8■■□□□ 1.42e-6■□□□□ 8.8
NCBP2P52298 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.78■■□□□ 1.42e-9■□□□□ 8.8
NCBP2P52298 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.342e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.342e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.242e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.84■□□□□ 0.932e-6■□□□□ 8.8
NCBP2P52298 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.92e-9■□□□□ 8.8
NCBP2P52298 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.22■□□□□ 0.832e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-214ENST00000466895 948 ntTSL 519.46■□□□□ 0.712e-6■□□□□ 8.8
NCBP2P52298 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.592e-6■□□□□ 8.8
Retrieved 100 of 18,329 protein–RNA pairs in 198.8 ms