Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CAPN3P20807 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CAPN3P20807 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 KRT18P58-201ENST00000527480 1120 ntBASIC16.17■□□□□ 0.18
CAPN3P20807 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.17■□□□□ 0.18
CAPN3P20807 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.17■□□□□ 0.18
CAPN3P20807 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CAPN3P20807 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 AC004817.3-201ENST00000602957 2129 ntBASIC16.17■□□□□ 0.18
CAPN3P20807 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
CAPN3P20807 INTS4P1-201ENST00000438455 1935 ntBASIC16.17■□□□□ 0.18
CAPN3P20807 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CAPN3P20807 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CAPN3P20807 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 AL021920.2-201ENST00000624828 1351 ntBASIC16.16■□□□□ 0.18
CAPN3P20807 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.16■□□□□ 0.18
CAPN3P20807 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
CAPN3P20807 AP001005.1-201ENST00000571755 1248 ntBASIC16.16■□□□□ 0.18
CAPN3P20807 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.16■□□□□ 0.18
CAPN3P20807 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CAPN3P20807 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.16■□□□□ 0.18
CAPN3P20807 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CAPN3P20807 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CAPN3P20807 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.15■□□□□ 0.18
CAPN3P20807 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.15■□□□□ 0.18
CAPN3P20807 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 KRT16P4-201ENST00000453883 522 ntBASIC16.15■□□□□ 0.18
CAPN3P20807 SIGLEC30P-201ENST00000455569 941 ntBASIC16.15■□□□□ 0.18
CAPN3P20807 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.15■□□□□ 0.18
CAPN3P20807 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CAPN3P20807 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CAPN3P20807 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.15■□□□□ 0.18
CAPN3P20807 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms