Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 ESRRAP1-201ENST00000400596 1257 ntBASIC14.99□□□□□ -0.01
APOA1P02647 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 BX088651.1-201ENST00000540551 451 ntBASIC14.99□□□□□ -0.01
APOA1P02647 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.99□□□□□ -0.01
APOA1P02647 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.99□□□□□ -0.01
APOA1P02647 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOA1P02647 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
APOA1P02647 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC14.98□□□□□ -0.01
APOA1P02647 MIR3917-201ENST00000580971 93 ntBASIC14.98□□□□□ -0.01
APOA1P02647 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
APOA1P02647 AC073648.6-201ENST00000641589 218 ntBASIC14.98□□□□□ -0.01
APOA1P02647 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
APOA1P02647 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
APOA1P02647 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
APOA1P02647 ALOX12P2-203ENST00000570921 1945 ntBASIC14.98□□□□□ -0.01
APOA1P02647 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.98□□□□□ -0.01
APOA1P02647 AC013268.4-201ENST00000637413 2228 ntBASIC14.97□□□□□ -0.01
APOA1P02647 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOA1P02647 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
APOA1P02647 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
APOA1P02647 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
APOA1P02647 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.97□□□□□ -0.01
APOA1P02647 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms