Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.22□□□□□ -0.45
TNFRSF6BO95407 SBF1P1-201ENST00000444527 5631 ntBASIC12.22□□□□□ -0.45
TNFRSF6BO95407 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 AL353692.3-201ENST00000407031 1396 ntBASIC12.21□□□□□ -0.45
TNFRSF6BO95407 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 INGX-201ENST00000359239 846 ntBASIC12.21□□□□□ -0.45
TNFRSF6BO95407 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 MIR1238-201ENST00000408483 83 ntBASIC12.21□□□□□ -0.45
TNFRSF6BO95407 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TNFRSF6BO95407 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 LINC00895-201ENST00000629028 1637 ntBASIC12.21□□□□□ -0.46
TNFRSF6BO95407 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TNFRSF6BO95407 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms