Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 AC233702.3-201ENST00000578656 1387 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 RCN1P2-201ENST00000398357 915 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 AC104076.2-201ENST00000448912 469 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 BX276092.5-203ENST00000456199 560 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 POU5F1P6-201ENST00000466990 990 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC188H7C350 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC188H7C350 BNIP3P18-201ENST00000593976 575 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 Z69720.1-201ENST00000601483 472 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC188H7C350 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 KRT8P39-201ENST00000396270 1433 ntBASIC17.44■□□□□ 0.38
CCDC188H7C350 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC188H7C350 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC188H7C350 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC188H7C350 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 MINOS1P3-201ENST00000457048 203 ntBASIC17.43■□□□□ 0.38
CCDC188H7C350 AC096582.2-201ENST00000510860 516 ntBASIC17.43■□□□□ 0.38
CCDC188H7C350 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.43■□□□□ 0.38
CCDC188H7C350 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.43■□□□□ 0.38
CCDC188H7C350 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
CCDC188H7C350 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC188H7C350 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC188H7C350 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC188H7C350 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCDC188H7C350 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC188H7C350 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCDC188H7C350 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CCDC188H7C350 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms