Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 IGHV3-22-201ENST00000520721 359 ntBASIC15.86■□□□□ 0.13
RNF6Q9Y252 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 AC132872.4-202ENST00000622924 2756 ntBASIC15.86■□□□□ 0.13
RNF6Q9Y252 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF6Q9Y252 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.86■□□□□ 0.13
RNF6Q9Y252 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 AC092910.1-201ENST00000482027 1129 ntBASIC15.85■□□□□ 0.13
RNF6Q9Y252 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 AC145285.3-201ENST00000564603 959 ntBASIC15.85■□□□□ 0.13
RNF6Q9Y252 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF6Q9Y252 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF6Q9Y252 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 AC098831.1-202ENST00000438821 336 ntBASIC15.84■□□□□ 0.13
RNF6Q9Y252 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 AC025062.2-201ENST00000605477 670 ntBASIC15.84■□□□□ 0.13
RNF6Q9Y252 AC027601.4-201ENST00000611259 610 ntBASIC15.84■□□□□ 0.13
RNF6Q9Y252 AL139288.1-201ENST00000623748 933 ntBASIC15.84■□□□□ 0.13
RNF6Q9Y252 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RNF6Q9Y252 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF6Q9Y252 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms