Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.99□□□□□ -0.17
LIN7CQ9NUP9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 AC022188.1-201ENST00000620960 1664 ntBASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.98□□□□□ -0.17
LIN7CQ9NUP9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AL021920.2-201ENST00000624828 1351 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC132938.5-201ENST00000624980 1813 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC132008.2-207ENST00000454517 770 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 HLA-J-202ENST00000469281 1241 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 REXO1L6P-202ENST00000619970 1078 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AD001527.2-201ENST00000622994 785 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC073592.5-201ENST00000624854 528 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 NORAD-201ENST00000565493 5339 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms