Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC38A3Q99624 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SLC38A3Q99624 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC38A3Q99624 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SLC38A3Q99624 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 SPCS2P4-201ENST00000436160 681 ntBASIC16.22■□□□□ 0.19
SLC38A3Q99624 FAM86GP-201ENST00000448322 971 ntBASIC16.22■□□□□ 0.19
SLC38A3Q99624 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AC069335.1-201ENST00000489972 472 ntBASIC16.22■□□□□ 0.19
SLC38A3Q99624 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.22■□□□□ 0.19
SLC38A3Q99624 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC38A3Q99624 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC38A3Q99624 AC108860.2-201ENST00000562760 2183 ntBASIC16.21■□□□□ 0.19
SLC38A3Q99624 AC092053.1-201ENST00000605787 1936 ntBASIC16.21■□□□□ 0.19
SLC38A3Q99624 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 AC021097.1-201ENST00000607902 574 ntBASIC16.21■□□□□ 0.19
SLC38A3Q99624 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC38A3Q99624 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SLC38A3Q99624 AL139384.1-201ENST00000612143 3047 ntBASIC16.21■□□□□ 0.18
SLC38A3Q99624 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC38A3Q99624 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC38A3Q99624 AL023806.1-201ENST00000603994 1649 ntBASIC16.2■□□□□ 0.18
SLC38A3Q99624 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC38A3Q99624 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC38A3Q99624 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC38A3Q99624 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC38A3Q99624 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 314.2 ms