Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC006449.6-201ENST00000612330 2296 ntBASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 LINC00554-201ENST00000564841 3011 ntBASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC44A1Q8WWI5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 KRT8P39-201ENST00000396270 1433 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 NCF1C-201ENST00000438382 1427 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 AP005117.1-201ENST00000584346 1413 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 PCED1CP-201ENST00000419887 785 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 PAWRP1-201ENST00000451083 565 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 AC012615.1-201ENST00000565797 1299 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 MPDU1-223ENST00000582151 728 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 AC064862.7-201ENST00000604520 867 ntBASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC44A1Q8WWI5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 BX005266.1-201ENST00000473402 457 ntBASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AP000867.3-201ENST00000524675 377 ntBASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AC099336.1-202ENST00000602961 463 ntBASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 AC010491.1-201ENST00000563101 2797 ntBASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC44A1Q8WWI5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms