Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RP1L1Q8IWN7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.17■□□□□ 0.02
RP1L1Q8IWN7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 NEFHP1-201ENST00000412845 2629 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 AC008267.7-201ENST00000624570 1194 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 CROCCP1-201ENST00000426910 5675 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ABALON-201ENST00000629058 1903 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 AP3S2-216ENST00000617003 1561 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.16■□□□□ 0.02
RP1L1Q8IWN7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RP1L1Q8IWN7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms