Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 AC132938.6-201ENST00000623828 1655 ntBASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 AC091607.1-201ENST00000490318 1060 ntBASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FOXR1Q6PIV2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 AF238378.1-201ENST00000526806 358 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 AF228730.7-201ENST00000641842 219 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 LINC02012-201ENST00000608206 1725 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 AC009102.3-201ENST00000623118 1491 ntBASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
FOXR1Q6PIV2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 AC009065.1-201ENST00000564055 1225 ntBASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 AP001005.1-201ENST00000571755 1248 ntBASIC17.53■□□□□ 0.4
FOXR1Q6PIV2 AC064862.7-201ENST00000604520 867 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms