Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 AL450487.1-201ENST00000426799 995 ntBASIC14.71□□□□□ -0.05
C11orf88Q6PI97 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
C11orf88Q6PI97 AP002414.2-201ENST00000591780 3365 ntBASIC14.71□□□□□ -0.06
C11orf88Q6PI97 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
C11orf88Q6PI97 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 TPM4P1-201ENST00000436100 807 ntBASIC14.7□□□□□ -0.06
C11orf88Q6PI97 BX276092.5-203ENST00000456199 560 ntBASIC14.7□□□□□ -0.06
C11orf88Q6PI97 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 AC116353.5-201ENST00000638148 1699 ntBASIC14.7□□□□□ -0.06
C11orf88Q6PI97 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 RNF216P1-203ENST00000404404 2427 ntBASIC14.7□□□□□ -0.06
C11orf88Q6PI97 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.7□□□□□ -0.06
C11orf88Q6PI97 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AL136379.1-201ENST00000623471 2642 ntBASIC14.69□□□□□ -0.06
C11orf88Q6PI97 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AC009949.1-201ENST00000623048 1830 ntBASIC14.69□□□□□ -0.06
C11orf88Q6PI97 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AC132938.6-201ENST00000623828 1655 ntBASIC14.69□□□□□ -0.06
C11orf88Q6PI97 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.69□□□□□ -0.06
C11orf88Q6PI97 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms