Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 NCF1C-201ENST00000438382 1427 ntBASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6AP1LQ52LC2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 AP005117.1-201ENST00000584346 1413 ntBASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6AP1LQ52LC2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 KRT16P4-201ENST00000453883 522 ntBASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6AP1LQ52LC2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6AP1LQ52LC2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ATP6AP1LQ52LC2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.23■□□□□ 0.19
ATP6AP1LQ52LC2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ATP6AP1LQ52LC2 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms