Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 PCDHB18P-202ENST00000526308 3197 ntBASIC11.34□□□□□ -0.59
PCP4P48539 CSPG4P11-201ENST00000560634 4910 ntBASIC11.34□□□□□ -0.59
PCP4P48539 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 AL365181.2-201ENST00000606343 3222 ntBASIC11.34□□□□□ -0.59
PCP4P48539 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PCP4P48539 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 AC136621.1-201ENST00000624017 2304 ntBASIC11.34□□□□□ -0.59
PCP4P48539 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 AC010491.1-201ENST00000563101 2797 ntBASIC11.34□□□□□ -0.59
PCP4P48539 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
PCP4P48539 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.34□□□□□ -0.59
PCP4P48539 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 AC078925.2-201ENST00000624013 1973 ntBASIC11.34□□□□□ -0.59
PCP4P48539 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 LINC00638-201ENST00000555578 2518 ntBASIC11.34□□□□□ -0.59
PCP4P48539 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PCP4P48539 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PCP4P48539 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
PCP4P48539 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 GOLGA6L5P-202ENST00000515341 1828 ntBASIC11.33□□□□□ -0.6
PCP4P48539 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.33□□□□□ -0.6
PCP4P48539 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.33□□□□□ -0.6
PCP4P48539 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AC073335.2-201ENST00000610177 3441 ntBASIC11.33□□□□□ -0.6
PCP4P48539 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms