RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
CTCFL-217ENST00000608425 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
CTCFL-217ENST00000608425 PELP1Q8IZL8 1130 aaKnown RBP20.53■□□□□ 0.88
CTCFL-217ENST00000608425 HRCP23327 699 aa20.37■□□□□ 0.85
CTCFL-217ENST00000608425 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
CTCFL-217ENST00000608425 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
CTCFL-217ENST00000608425 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
CTCFL-217ENST00000608425 MYT1Q01538 1121 aa19.83■□□□□ 0.77
CTCFL-217ENST00000608425 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
CTCFL-217ENST00000608425 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
CTCFL-217ENST00000608425 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
CTCFL-217ENST00000608425 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
CTCFL-217ENST00000608425 MYO15BQ96JP2 1530 aa19.28■□□□□ 0.68
CTCFL-217ENST00000608425 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
CTCFL-217ENST00000608425 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
CTCFL-217ENST00000608425 NACADO15069 1562 aa19■□□□□ 0.63
CTCFL-217ENST00000608425 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
CTCFL-217ENST00000608425 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
CTCFL-217ENST00000608425 ABCC9O60706 1549 aa18.91■□□□□ 0.62
CTCFL-217ENST00000608425 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
CTCFL-217ENST00000608425 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
CTCFL-217ENST00000608425 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.6
CTCFL-217ENST00000608425 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
CTCFL-217ENST00000608425 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
CTCFL-217ENST00000608425 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
CTCFL-217ENST00000608425 CHIC1Q5VXU3 224 aa18.7■□□□□ 0.58
CTCFL-217ENST00000608425 TRIM26Q12899 539 aaPredicted RBP18.67■□□□□ 0.58
CTCFL-217ENST00000608425 ZEB1P37275 1124 aaPredicted RBP18.62■□□□□ 0.57
CTCFL-217ENST00000608425 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
CTCFL-217ENST00000608425 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
CTCFL-217ENST00000608425 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
CTCFL-217ENST00000608425 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
CTCFL-217ENST00000608425 CECR2Q9BXF3 1484 aa18.37■□□□□ 0.53
CTCFL-217ENST00000608425 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
CTCFL-217ENST00000608425 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
CTCFL-217ENST00000608425 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
CTCFL-217ENST00000608425 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
CTCFL-217ENST00000608425 DIEXFQ68CQ4 756 aaKnown RBP18.26■□□□□ 0.51
CTCFL-217ENST00000608425 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
CTCFL-217ENST00000608425 WIZO95785 1651 aa18.24■□□□□ 0.51
CTCFL-217ENST00000608425 SMARCA4P51532 1647 aa18.18■□□□□ 0.5
CTCFL-217ENST00000608425 BICRAQ9NZM4 1560 aa18.16■□□□□ 0.5
CTCFL-217ENST00000608425 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
CTCFL-217ENST00000608425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
CTCFL-217ENST00000608425 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
CTCFL-217ENST00000608425 ERICH6Q7L0X2 663 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 PEG3Q9GZU2 1588 aa17.97■□□□□ 0.47
CTCFL-217ENST00000608425 APLP2Q06481 763 aa17.93■□□□□ 0.46
CTCFL-217ENST00000608425 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
CTCFL-217ENST00000608425 CCER1Q8TC90 406 aaPredicted RBP17.9■□□□□ 0.46
CTCFL-217ENST00000608425 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
CTCFL-217ENST00000608425 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTCFL-217ENST00000608425 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
CTCFL-217ENST00000608425 MIER1Q8N108 512 aa17.81■□□□□ 0.44
CTCFL-217ENST00000608425 SUPT16HQ9Y5B9 1047 aaKnown RBP17.81■□□□□ 0.44
CTCFL-217ENST00000608425 ANO8Q9HCE9 1232 aaPredicted RBP17.77■□□□□ 0.44
CTCFL-217ENST00000608425 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
CTCFL-217ENST00000608425 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
CTCFL-217ENST00000608425 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
CTCFL-217ENST00000608425 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
CTCFL-217ENST00000608425 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
CTCFL-217ENST00000608425 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
CTCFL-217ENST00000608425 BCANQ96GW7 911 aa17.51■□□□□ 0.39
CTCFL-217ENST00000608425 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
CTCFL-217ENST00000608425 EEA1Q15075 1411 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 MSH5O43196 834 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
CTCFL-217ENST00000608425 SALL2Q9Y467 1007 aaPredicted RBP17.47■□□□□ 0.39
CTCFL-217ENST00000608425 WRNQ14191 1432 aaPredicted RBP eCLIP17.46■□□□□ 0.39
CTCFL-217ENST00000608425 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
CTCFL-217ENST00000608425 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
CTCFL-217ENST00000608425 SOGA1O94964 1423 aa17.36■□□□□ 0.37
CTCFL-217ENST00000608425 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
CTCFL-217ENST00000608425 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
CTCFL-217ENST00000608425 BIVM-ERCC5R4GMW8 1640 aa17.31■□□□□ 0.36
CTCFL-217ENST00000608425 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
CTCFL-217ENST00000608425 PRDM2Q13029 1718 aa17.29■□□□□ 0.36
CTCFL-217ENST00000608425 RUSC2Q8N2Y8 1516 aa17.27■□□□□ 0.35
CTCFL-217ENST00000608425 KIF21BO75037 1637 aa17.26■□□□□ 0.35
CTCFL-217ENST00000608425 TNIKQ9UKE5 1360 aa17.26■□□□□ 0.35
CTCFL-217ENST00000608425 CFTRP13569 1480 aa17.25■□□□□ 0.35
CTCFL-217ENST00000608425 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
CTCFL-217ENST00000608425 ITGAEP38570 1179 aa17.24■□□□□ 0.35
CTCFL-217ENST00000608425 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
CTCFL-217ENST00000608425 UBE2Q2Q8WVN8 375 aa17.22■□□□□ 0.35
CTCFL-217ENST00000608425 FKBP8Q14318 412 aa17.21■□□□□ 0.35
CTCFL-217ENST00000608425 CEP162Q5TB80 1403 aa17.2■□□□□ 0.34
CTCFL-217ENST00000608425 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
CTCFL-217ENST00000608425 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
CTCFL-217ENST00000608425 CUX1P39880 1505 aa17.13■□□□□ 0.33
CTCFL-217ENST00000608425 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
CTCFL-217ENST00000608425 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
CTCFL-217ENST00000608425 IL27Q8NEV9 243 aa17.07■□□□□ 0.32
CTCFL-217ENST00000608425 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
CTCFL-217ENST00000608425 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
CTCFL-217ENST00000608425 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
CTCFL-217ENST00000608425 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
CTCFL-217ENST00000608425 PRXQ9BXM0 1461 aa17■□□□□ 0.31
CTCFL-217ENST00000608425 NBR1Q14596 966 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms