Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCNN1AP37088 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.39■□□□□ 0.37
SCNN1AP37088 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 POLD2P1-201ENST00000511220 997 ntBASIC17.38■□□□□ 0.37
SCNN1AP37088 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.38■□□□□ 0.37
SCNN1AP37088 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 AL078644.1-201ENST00000609881 752 ntBASIC17.38■□□□□ 0.37
SCNN1AP37088 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 AC092919.2-201ENST00000623631 1645 ntBASIC17.38■□□□□ 0.37
SCNN1AP37088 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SCNN1AP37088 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCNN1AP37088 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SCNN1AP37088 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.37■□□□□ 0.37
SCNN1AP37088 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.37■□□□□ 0.37
SCNN1AP37088 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.37■□□□□ 0.37
SCNN1AP37088 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCNN1AP37088 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SCNN1AP37088 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCNN1AP37088 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.36■□□□□ 0.37
SCNN1AP37088 AC023274.1-201ENST00000418278 595 ntBASIC17.36■□□□□ 0.37
SCNN1AP37088 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 KRT18P34-201ENST00000488218 1270 ntBASIC17.36■□□□□ 0.37
SCNN1AP37088 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.36■□□□□ 0.37
SCNN1AP37088 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.36■□□□□ 0.37
SCNN1AP37088 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
SCNN1AP37088 AC099522.2-201ENST00000607001 744 ntBASIC17.36■□□□□ 0.37
SCNN1AP37088 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms