Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.35■□□□□ 0.05
HTR1AP08908 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
HTR1AP08908 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 SPDYE15P-201ENST00000424157 909 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 ATP5G1P1-201ENST00000448724 379 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 COX11P1-201ENST00000489116 835 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 AL441883.1-201ENST00000566170 1045 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.34■□□□□ 0.05
HTR1AP08908 GPR32P1-201ENST00000601788 811 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR1AP08908 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 LINC00895-201ENST00000629028 1637 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR1AP08908 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HTR1AP08908 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 GGT4P-201ENST00000623672 1708 ntBASIC15.34■□□□□ 0.05
HTR1AP08908 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTR1AP08908 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR1AP08908 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HTR1AP08908 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.33■□□□□ 0.05
HTR1AP08908 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HTR1AP08908 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR1AP08908 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.33■□□□□ 0.05
HTR1AP08908 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1AP08908 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HTR1AP08908 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HTR1AP08908 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 STARP1-201ENST00000397973 869 ntBASIC15.33■□□□□ 0.04
HTR1AP08908 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.33■□□□□ 0.04
HTR1AP08908 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR1AP08908 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTR1AP08908 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR1AP08908 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1AP08908 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HTR1AP08908 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.32■□□□□ 0.04
HTR1AP08908 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.32■□□□□ 0.04
HTR1AP08908 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HTR1AP08908 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HTR1AP08908 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms