Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TPM3P06753 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.87■□□□□ 0.61
TPM3P06753 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.87■□□□□ 0.61
TPM3P06753 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.87■□□□□ 0.61
TPM3P06753 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TPM3P06753 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.87■□□□□ 0.61
TPM3P06753 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.87■□□□□ 0.61
TPM3P06753 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.87■□□□□ 0.61
TPM3P06753 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.87■□□□□ 0.61
TPM3P06753 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
TPM3P06753 DBET-201ENST00000630918 3363 ntBASIC18.87■□□□□ 0.61
TPM3P06753 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TPM3P06753 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.86■□□□□ 0.61
TPM3P06753 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TPM3P06753 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.86■□□□□ 0.61
TPM3P06753 AC003669.1-201ENST00000334569 611 ntBASIC18.86■□□□□ 0.61
TPM3P06753 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.86■□□□□ 0.61
TPM3P06753 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 AC010203.1-204ENST00000548782 407 ntBASIC18.86■□□□□ 0.61
TPM3P06753 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.86■□□□□ 0.61
TPM3P06753 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 AC139887.4-201ENST00000607877 719 ntBASIC18.86■□□□□ 0.61
TPM3P06753 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 AL603832.2-201ENST00000566195 2125 ntBASIC18.86■□□□□ 0.61
TPM3P06753 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TPM3P06753 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TPM3P06753 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TPM3P06753 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.86■□□□□ 0.61
TPM3P06753 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AL353593.2-201ENST00000602529 1483 ntBASIC18.85■□□□□ 0.61
TPM3P06753 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TPM3P06753 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 AC144831.1-201ENST00000573312 2656 ntBASIC18.85■□□□□ 0.61
TPM3P06753 AL596087.1-201ENST00000400979 1969 ntBASIC18.85■□□□□ 0.61
TPM3P06753 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM3P06753 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM3P06753 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.85■□□□□ 0.61
TPM3P06753 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms