Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.88■□□□□ 0.13
MT-ND1P03886 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
MT-ND1P03886 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 TUBB8P12-201ENST00000308911 1335 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 TUBB7P-202ENST00000428444 1305 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 TUBB8P7-204ENST00000567960 1332 ntBASIC15.88■□□□□ 0.13
MT-ND1P03886 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
MT-ND1P03886 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.88■□□□□ 0.13
MT-ND1P03886 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
MT-ND1P03886 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 STK19B-204ENST00000512515 211 ntBASIC15.87■□□□□ 0.13
MT-ND1P03886 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AP002490.2-201ENST00000524791 560 ntBASIC15.87■□□□□ 0.13
MT-ND1P03886 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.87■□□□□ 0.13
MT-ND1P03886 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.87■□□□□ 0.13
MT-ND1P03886 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
MT-ND1P03886 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.86■□□□□ 0.13
MT-ND1P03886 AL845331.1-201ENST00000424978 1190 ntBASIC15.86■□□□□ 0.13
MT-ND1P03886 AC103564.2-201ENST00000432853 1299 ntBASIC15.86■□□□□ 0.13
MT-ND1P03886 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.86■□□□□ 0.13
MT-ND1P03886 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.86■□□□□ 0.13
MT-ND1P03886 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.86■□□□□ 0.13
MT-ND1P03886 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 AC005336.2-201ENST00000593183 939 ntBASIC15.86■□□□□ 0.13
MT-ND1P03886 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.86■□□□□ 0.13
MT-ND1P03886 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms