Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
SIX6O95475 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 AC023908.3-201ENST00000564211 3047 ntBASIC14.08□□□□□ -0.16
SIX6O95475 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.08□□□□□ -0.16
SIX6O95475 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.08□□□□□ -0.16
SIX6O95475 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.08□□□□□ -0.16
SIX6O95475 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 AC116562.2-201ENST00000507042 360 ntBASIC14.08□□□□□ -0.16
SIX6O95475 NUDT16P1-203ENST00000513809 620 ntBASIC14.08□□□□□ -0.16
SIX6O95475 RNA5SP413-201ENST00000516373 109 ntBASIC14.08□□□□□ -0.16
SIX6O95475 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.08□□□□□ -0.16
SIX6O95475 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.08□□□□□ -0.16
SIX6O95475 AC009154.2-201ENST00000621177 724 ntBASIC14.08□□□□□ -0.16
SIX6O95475 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
SIX6O95475 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SIX6O95475 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 AC023157.3-201ENST00000619086 2088 ntBASIC14.08□□□□□ -0.16
SIX6O95475 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SIX6O95475 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 GPR89P-201ENST00000407924 1495 ntBASIC14.07□□□□□ -0.16
SIX6O95475 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 MYCLP1-201ENST00000372451 1075 ntBASIC14.07□□□□□ -0.16
SIX6O95475 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 TSPY17P-201ENST00000450329 467 ntBASIC14.07□□□□□ -0.16
SIX6O95475 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.07□□□□□ -0.16
SIX6O95475 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.07□□□□□ -0.16
SIX6O95475 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.07□□□□□ -0.16
SIX6O95475 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 TUBB8P12-201ENST00000308911 1335 ntBASIC14.07□□□□□ -0.16
SIX6O95475 TUBB7P-202ENST00000428444 1305 ntBASIC14.07□□□□□ -0.16
SIX6O95475 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 TUBB8P7-204ENST00000567960 1332 ntBASIC14.07□□□□□ -0.16
SIX6O95475 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SIX6O95475 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SIX6O95475 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SIX6O95475 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SIX6O95475 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SIX6O95475 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SIX6O95475 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms