Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SNAI2O43623 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.63□□□□□ -0.39
SNAI2O43623 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.63□□□□□ -0.39
SNAI2O43623 AP002490.2-201ENST00000524791 560 ntBASIC12.63□□□□□ -0.39
SNAI2O43623 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.63□□□□□ -0.39
SNAI2O43623 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 AC109462.3-201ENST00000573934 613 ntBASIC12.63□□□□□ -0.39
SNAI2O43623 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 GPR32P1-201ENST00000601788 811 ntBASIC12.63□□□□□ -0.39
SNAI2O43623 AL138966.2-201ENST00000621997 464 ntBASIC12.63□□□□□ -0.39
SNAI2O43623 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.63□□□□□ -0.39
SNAI2O43623 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SNAI2O43623 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SNAI2O43623 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 AL023973.1-201ENST00000624619 620 ntBASIC12.62□□□□□ -0.39
SNAI2O43623 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.62□□□□□ -0.39
SNAI2O43623 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.62□□□□□ -0.39
SNAI2O43623 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SNAI2O43623 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
SNAI2O43623 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SNAI2O43623 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.61□□□□□ -0.39
SNAI2O43623 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SNAI2O43623 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms