Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 AC007950.2-201ENST00000615045 2347 ntBASIC15.32■□□□□ 0.04
RNF13O43567 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF13O43567 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.32■□□□□ 0.04
RNF13O43567 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF13O43567 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF13O43567 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
RNF13O43567 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF13O43567 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 SAPCD2P3-201ENST00000455031 850 ntBASIC15.31■□□□□ 0.04
RNF13O43567 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 AP002490.2-201ENST00000524791 560 ntBASIC15.31■□□□□ 0.04
RNF13O43567 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF13O43567 AL589182.2-201ENST00000619332 1049 ntBASIC15.31■□□□□ 0.04
RNF13O43567 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 AL590787.1-201ENST00000568856 1315 ntBASIC15.31■□□□□ 0.04
RNF13O43567 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RNF13O43567 AL021920.2-201ENST00000624828 1351 ntBASIC15.31■□□□□ 0.04
RNF13O43567 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RNF13O43567 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF13O43567 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF13O43567 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF13O43567 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF13O43567 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 FGFR3P6-201ENST00000457012 610 ntBASIC15.3■□□□□ 0.04
RNF13O43567 KRT18P56-201ENST00000507275 550 ntBASIC15.3■□□□□ 0.04
RNF13O43567 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 SART3-203ENST00000546611 1184 ntBASIC15.3■□□□□ 0.04
RNF13O43567 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF13O43567 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF13O43567 AC139887.3-201ENST00000568585 713 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms