Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB3Q9Y5G1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 AC018712.1-201ENST00000455767 687 ntBASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 RNA5SP419-201ENST00000515908 135 ntBASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 MTDHP3-201ENST00000594186 672 ntBASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 AL139288.1-201ENST00000623748 933 ntBASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB3Q9Y5G1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AC148477.5-201ENST00000625164 1645 ntBASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AL022342.1-201ENST00000400363 863 ntBASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AL031284.1-201ENST00000419297 478 ntBASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AP001269.4-201ENST00000609611 512 ntBASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB3Q9Y5G1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms