Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 RCN1P2-201ENST00000398357 915 ntBASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 MIR3652-201ENST00000579335 131 ntBASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AC019129.2-201ENST00000609837 1235 ntBASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 KRT8P10-201ENST00000450021 1447 ntBASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HHLA3Q9XRX5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 HCG4P8-203ENST00000443049 980 ntBASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 KRT16P4-201ENST00000453883 522 ntBASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 BNIP3P18-201ENST00000593976 575 ntBASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 AC114341.1-201ENST00000618070 349 ntBASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 INTS4P1-201ENST00000438455 1935 ntBASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.34□□□□□ -0.43
HHLA3Q9XRX5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HHLA3Q9XRX5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HHLA3Q9XRX5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.43
HHLA3Q9XRX5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.33□□□□□ -0.43
HHLA3Q9XRX5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.33□□□□□ -0.44
HHLA3Q9XRX5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms