Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 NDUFS7-206ENST00000535382 3050 ntTSL 213.75□□□□□ -0.217e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.257e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-216ENST00000457226 736 ntTSL 512.71□□□□□ -0.377e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.39□□□□□ -0.437e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC12.18□□□□□ -0.467e-6■□□□□ 10.7
CSTF2TQ9H0L4 PHYKPL-202ENST00000323594 739 ntTSL 511.32□□□□□ -0.67e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.93□□□□□ -0.667e-6■□□□□ 10.7
CSTF2TQ9H0L4 ZFAND3-202ENST00000373389 531 ntTSL 510.43□□□□□ -0.747e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC10.35□□□□□ -0.757e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC9.96□□□□□ -0.817e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC9.74□□□□□ -0.857e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-216ENST00000511797 671 ntTSL 59.71□□□□□ -0.867e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-212ENST00000508277 491 ntTSL 59.62□□□□□ -0.877e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-214ENST00000509039 1569 ntTSL 29.45□□□□□ -0.97e-6■□□□□ 10.7
CSTF2TQ9H0L4 PTDSS2-210ENST00000530087 596 ntTSL 29.27□□□□□ -0.934e-6■□□□□ 10.7
CSTF2TQ9H0L4 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.977e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-213ENST00000439732 755 ntTSL 38.86□□□□□ -0.997e-6■□□□□ 10.7
CSTF2TQ9H0L4 PHYKPL-217ENST00000511716 562 ntTSL 38.71□□□□□ -1.027e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-224ENST00000634536 556 ntTSL 28.47□□□□□ -1.057e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-260ENST00000637352 128 ntTSL 57.91□□□□□ -1.147e-6■□□□□ 10.7
CSTF2TQ9H0L4 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.177e-6■□□□□ 10.7
CSTF2TQ9H0L4 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.62□□□□□ -1.197e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.42□□□□□ -1.227e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-262ENST00000637383 162 ntTSL 57.33□□□□□ -1.247e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-224ENST00000539108 244 ntTSL 37.28□□□□□ -1.247e-6■□□□□ 10.7
CSTF2TQ9H0L4 ADD1-226ENST00000540541 546 ntTSL 27.05□□□□□ -1.287e-6■□□□□ 10.7
CSTF2TQ9H0L4 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.79□□□□□ -1.327e-6■□□□□ 10.7
CSTF2TQ9H0L4 LSM8-202ENST00000411938 290 ntTSL 36.67□□□□□ -1.347e-6■□□□□ 10.7
CSTF2TQ9H0L4 PABPN1-204ENST00000554062 589 ntTSL 36.53□□□□□ -1.367e-6■□□□□ 10.7
CSTF2TQ9H0L4 SMARCA2-257ENST00000637097 100 ntTSL 52.1□□□□□ -2.077e-6■□□□□ 10.7
CSTF2TQ9H0L4 MARCH7-205ENST00000421037 559 ntTSL 412.89□□□□□ -0.356e-10■□□□□ 10.7
CSTF2TQ9H0L4 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC10.99□□□□□ -0.656e-10■□□□□ 10.7
CSTF2TQ9H0L4 MARCH7-207ENST00000473749 821 ntTSL 310.23□□□□□ -0.776e-10■□□□□ 10.7
CSTF2TQ9H0L4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.436e-10■□□□□ 10.7
CSTF2TQ9H0L4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.96e-10■□□□□ 10.7
CSTF2TQ9H0L4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.9■□□□□ 0.147e-19■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-202ENST00000415100 661 ntTSL 520.67■□□□□ 0.93e-10■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.843e-10■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-206ENST00000496944 586 ntTSL 219.78■□□□□ 0.763e-10■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-205ENST00000494966 441 ntTSL 311.81□□□□□ -0.523e-10■□□□□ 10.7
CSTF2TQ9H0L4 SRC-207ENST00000477066 3300 ntTSL 211.53□□□□□ -0.563e-10■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-203ENST00000437094 674 ntTSL 311.43□□□□□ -0.583e-10■□□□□ 10.7
CSTF2TQ9H0L4 NIPSNAP1-204ENST00000455496 600 ntTSL 39.2□□□□□ -0.943e-10■□□□□ 10.7
CSTF2TQ9H0L4 SRC-209ENST00000489153 551 ntTSL 35.14□□□□□ -1.593e-10■□□□□ 10.7
CSTF2TQ9H0L4 PGGHG-206ENST00000476372 2879 ntTSL 215.37■□□□□ 0.051e-7■□□□□ 10.7
CSTF2TQ9H0L4 ABCC3-212ENST00000513511 1042 ntTSL 513.07□□□□□ -0.321e-6■□□□□ 10.7
CSTF2TQ9H0L4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.08■■□□□ 1.453e-10■□□□□ 10.7
CSTF2TQ9H0L4 PI4KAP1-203ENST00000612500 1869 ntTSL 215.76■□□□□ 0.113e-10■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-220ENST00000489483 5682 ntTSL 214.48□□□□□ -0.091e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.04□□□□□ -0.321e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.83□□□□□ -0.361e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.381e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.36□□□□□ -0.431e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)12.29□□□□□ -0.441e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC11.94□□□□□ -0.51e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-222ENST00000496469 1034 ntTSL 511.84□□□□□ -0.511e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)11.7□□□□□ -0.541e-6■□□□□ 10.7
CSTF2TQ9H0L4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.021e-13■□□□□ 10.7
CSTF2TQ9H0L4 B2M-210ENST00000560681 572 ntTSL 414.24□□□□□ -0.134e-7■□□□□ 10.7
CSTF2TQ9H0L4 B2M-207ENST00000559907 499 ntTSL 313.24□□□□□ -0.294e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-212ENST00000602075 763 ntTSL 321.38■■□□□ 1.012e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-208ENST00000598415 715 ntTSL 221.38■■□□□ 1.012e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-210ENST00000600559 550 ntTSL 220.04■□□□□ 0.82e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.592e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-206ENST00000598090 463 ntTSL 318.6■□□□□ 0.572e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.572e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-203ENST00000593804 1586 ntTSL 218.49■□□□□ 0.552e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.93■□□□□ 0.462e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.412e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-211ENST00000601135 723 ntTSL 217.27■□□□□ 0.362e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-202ENST00000593561 546 ntTSL 416.02■□□□□ 0.162e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-213ENST00000602201 556 ntTSL 415.89■□□□□ 0.132e-7■□□□□ 10.7
CSTF2TQ9H0L4 DEDD2-207ENST00000598200 465 ntTSL 315.59■□□□□ 0.092e-7■□□□□ 10.7
CSTF2TQ9H0L4 HS6ST1-204ENST00000494089 585 ntTSL 216.96■□□□□ 0.313e-7■□□□□ 10.7
CSTF2TQ9H0L4 CROCCP2-207ENST00000640476 1750 ntTSL 518.45■□□□□ 0.542e-6■□□□□ 10.7
CSTF2TQ9H0L4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.12■□□□□ 0.492e-6■□□□□ 10.7
CSTF2TQ9H0L4 CROCCP2-206ENST00000639594 2175 ntTSL 1 (best)17.25■□□□□ 0.352e-6■□□□□ 10.7
CSTF2TQ9H0L4 CROCCP2-204ENST00000639456 2575 ntTSL 516.35■□□□□ 0.212e-6■□□□□ 10.7
CSTF2TQ9H0L4 CROCCP2-202ENST00000412962 2773 ntBASIC15.73■□□□□ 0.112e-6■□□□□ 10.7
CSTF2TQ9H0L4 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.953e-8■□□□□ 10.6
CSTF2TQ9H0L4 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.133e-8■□□□□ 10.6
CSTF2TQ9H0L4 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.163e-8■□□□□ 10.6
CSTF2TQ9H0L4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.331e-6■□□□□ 10.6
CSTF2TQ9H0L4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.362e-8■□□□□ 10.6
CSTF2TQ9H0L4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.13■□□□□ 0.812e-6■□□□□ 10.6
CSTF2TQ9H0L4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.542e-6■□□□□ 10.6
CSTF2TQ9H0L4 UPF1-213ENST00000601981 556 ntTSL 59.31□□□□□ -0.922e-6■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-208ENST00000547330 2275 ntTSL 1 (best)13.26□□□□□ -0.292e-8■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.412e-8■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.662e-8■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC10.52□□□□□ -0.722e-8■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.79□□□□□ -12e-8■□□□□ 10.6
CSTF2TQ9H0L4 ACSL3-208ENST00000495541 749 ntTSL 26.29□□□□□ -1.48e-16■□□□□ 10.6
CSTF2TQ9H0L4 PPP1R12A-216ENST00000550510 631 ntTSL 55.81□□□□□ -1.482e-8■□□□□ 10.6
CSTF2TQ9H0L4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.3■□□□□ 0.042e-7■□□□□ 10.6
CSTF2TQ9H0L4 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.22□□□□□ -0.292e-7■□□□□ 10.6
CSTF2TQ9H0L4 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.79□□□□□ -0.522e-7■□□□□ 10.6
CSTF2TQ9H0L4 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)11.57□□□□□ -0.562e-7■□□□□ 10.6
CSTF2TQ9H0L4 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.582e-7■□□□□ 10.6
Retrieved 100 of 19,151 protein–RNA pairs in 217.4 ms