RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
SMARCA2-252ENST00000636559 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
SMARCA2-252ENST00000636559 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-252ENST00000636559 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
SMARCA2-252ENST00000636559 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
SMARCA2-252ENST00000636559 APLP2Q06481 763 aa12.24□□□□□ -0.45
SMARCA2-252ENST00000636559 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-252ENST00000636559 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
SMARCA2-252ENST00000636559 TTBK1Q5TCY1 1321 aaPredicted RBP12.01□□□□□ -0.49
SMARCA2-252ENST00000636559 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
SMARCA2-252ENST00000636559 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
SMARCA2-252ENST00000636559 PELP1Q8IZL8 1130 aaKnown RBP11.88□□□□□ -0.51
SMARCA2-252ENST00000636559 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
SMARCA2-252ENST00000636559 UBTFP17480 764 aaKnown RBP11.86□□□□□ -0.51
SMARCA2-252ENST00000636559 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-252ENST00000636559 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
SMARCA2-252ENST00000636559 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
SMARCA2-252ENST00000636559 ABCC9O60706 1549 aa11.58□□□□□ -0.56
SMARCA2-252ENST00000636559 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
SMARCA2-252ENST00000636559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
SMARCA2-252ENST00000636559 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
SMARCA2-252ENST00000636559 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
SMARCA2-252ENST00000636559 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
SMARCA2-252ENST00000636559 PABPN1Q86U42 306 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMARCA2-252ENST00000636559 LOC105371045A0A1W2PR82 267 aa11.45□□□□□ -0.58
SMARCA2-252ENST00000636559 ITGAEP38570 1179 aa11.44□□□□□ -0.58
SMARCA2-252ENST00000636559 MYT1LQ9UL68 1186 aa11.43□□□□□ -0.58
SMARCA2-252ENST00000636559 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
SMARCA2-252ENST00000636559 NEFLP07196 543 aa11.36□□□□□ -0.59
SMARCA2-252ENST00000636559 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
SMARCA2-252ENST00000636559 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.6
SMARCA2-252ENST00000636559 HRCP23327 699 aa11.23□□□□□ -0.61
SMARCA2-252ENST00000636559 FAM50AQ14320 339 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-252ENST00000636559 FBLN2P98095 1184 aa11.14□□□□□ -0.63
SMARCA2-252ENST00000636559 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
SMARCA2-252ENST00000636559 SCRIBQ14160 1630 aa11.12□□□□□ -0.63
SMARCA2-252ENST00000636559 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
SMARCA2-252ENST00000636559 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-252ENST00000636559 ZCCHC6Q5VYS8 1495 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-252ENST00000636559 CCDC180Q9P1Z9 1646 aa11.05□□□□□ -0.64
SMARCA2-252ENST00000636559 NEUROD1Q13562 356 aa11.03□□□□□ -0.64
SMARCA2-252ENST00000636559 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
SMARCA2-252ENST00000636559 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
SMARCA2-252ENST00000636559 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
SMARCA2-252ENST00000636559 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-252ENST00000636559 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
SMARCA2-252ENST00000636559 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
SMARCA2-252ENST00000636559 CDK11AQ9UQ88 783 aaPredicted RBP10.9□□□□□ -0.66
SMARCA2-252ENST00000636559 ZNF777Q9ULD5 760 aaPredicted RBP10.88□□□□□ -0.67
SMARCA2-252ENST00000636559 RB1CC1Q8TDY2 1594 aa10.88□□□□□ -0.67
SMARCA2-252ENST00000636559 ANP32CO43423 234 aa10.86□□□□□ -0.67
SMARCA2-252ENST00000636559 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
SMARCA2-252ENST00000636559 BCANQ96GW7 911 aa10.81□□□□□ -0.68
SMARCA2-252ENST00000636559 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
SMARCA2-252ENST00000636559 MYT1Q01538 1121 aa10.78□□□□□ -0.68
SMARCA2-252ENST00000636559 NPM1P06748 294 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCA2-252ENST00000636559 NACADO15069 1562 aa10.76□□□□□ -0.69
SMARCA2-252ENST00000636559 ESF1Q9H501 851 aaKnown RBP10.75□□□□□ -0.69
SMARCA2-252ENST00000636559 CHMP7Q8WUX9 453 aaPredicted RBP10.71□□□□□ -0.69
SMARCA2-252ENST00000636559 NEFMP07197 916 aa10.71□□□□□ -0.7
SMARCA2-252ENST00000636559 TONSLQ96HA7 1378 aa10.7□□□□□ -0.7
SMARCA2-252ENST00000636559 RSF1Q96T23 1441 aaPredicted RBP10.69□□□□□ -0.7
SMARCA2-252ENST00000636559 DCAF1Q9Y4B6 1507 aa10.69□□□□□ -0.7
SMARCA2-252ENST00000636559 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
SMARCA2-252ENST00000636559 CHGAP10645 457 aaKnown RBP10.69□□□□□ -0.7
SMARCA2-252ENST00000636559 ZBTB47Q9UFB7 747 aaPredicted RBP10.69□□□□□ -0.7
SMARCA2-252ENST00000636559 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
SMARCA2-252ENST00000636559 CANXP27824 592 aaKnown RBP10.67□□□□□ -0.7
SMARCA2-252ENST00000636559 CHIC2Q9UKJ5 165 aa10.67□□□□□ -0.7
SMARCA2-252ENST00000636559 BAZ1BQ9UIG0 1483 aaKnown RBP10.67□□□□□ -0.7
SMARCA2-252ENST00000636559 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
SMARCA2-252ENST00000636559 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
SMARCA2-252ENST00000636559 GTF3C3Q9Y5Q9 886 aa10.65□□□□□ -0.7
SMARCA2-252ENST00000636559 CLIP1P30622 1438 aa10.64□□□□□ -0.71
SMARCA2-252ENST00000636559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMARCA2-252ENST00000636559 TSPY4P0CV99 314 aa10.63□□□□□ -0.71
SMARCA2-252ENST00000636559 TSPY10P0CW01 314 aa10.63□□□□□ -0.71
SMARCA2-252ENST00000636559 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
SMARCA2-252ENST00000636559 EEA1Q15075 1411 aa10.61□□□□□ -0.71
SMARCA2-252ENST00000636559 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
SMARCA2-252ENST00000636559 GOLGA3Q08378 1498 aa10.59□□□□□ -0.71
SMARCA2-252ENST00000636559 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
SMARCA2-252ENST00000636559 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
SMARCA2-252ENST00000636559 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
SMARCA2-252ENST00000636559 DDX10Q13206 875 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-252ENST00000636559 CEP162Q5TB80 1403 aa10.54□□□□□ -0.72
SMARCA2-252ENST00000636559 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
SMARCA2-252ENST00000636559 KCNH8Q96L42 1107 aa10.54□□□□□ -0.72
SMARCA2-252ENST00000636559 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
SMARCA2-252ENST00000636559 ACIN1Q9UKV3 1341 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-252ENST00000636559 RRP7BPQ9NSQ0 103 aa10.52□□□□□ -0.73
SMARCA2-252ENST00000636559 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
SMARCA2-252ENST00000636559 FAM9BQ8IZU0 186 aa10.51□□□□□ -0.73
SMARCA2-252ENST00000636559 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMARCA2-252ENST00000636559 MYO15BQ96JP2 1530 aa10.5□□□□□ -0.73
SMARCA2-252ENST00000636559 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
SMARCA2-252ENST00000636559 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
SMARCA2-252ENST00000636559 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
SMARCA2-252ENST00000636559 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
SMARCA2-252ENST00000636559 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms