RNA–Protein interactions for RNA: ENST00000496944.1

NIPSNAP1-206, Transcript of nipsnap homolog 1, humanhuman

TSL 2

Gene NIPSNAP1, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-206ENST00000496944 NISCHQ9Y2I1 1504 aa51.28■■■■■ 5.8
NIPSNAP1-206ENST00000496944 CCDC180Q9P1Z9 1646 aa45.48■■■■■ 4.87
NIPSNAP1-206ENST00000496944 ABCC9O60706 1549 aa43.98■■■■■ 4.63
NIPSNAP1-206ENST00000496944 ZCCHC6Q5VYS8 1495 aaKnown RBP42.81■■■■■ 4.44
NIPSNAP1-206ENST00000496944 NACADO15069 1562 aa42.65■■■■■ 4.42
NIPSNAP1-206ENST00000496944 RB1CC1Q8TDY2 1594 aa42.58■■■■■ 4.41
NIPSNAP1-206ENST00000496944 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
NIPSNAP1-206ENST00000496944 DCAF8L2P0C7V8 631 aa42.55■■■■■ 4.4
NIPSNAP1-206ENST00000496944 DCAF1Q9Y4B6 1507 aa42.51■■■■■ 4.4
NIPSNAP1-206ENST00000496944 UNC13AQ9UPW8 1703 aa41.58■■■■■ 4.25
NIPSNAP1-206ENST00000496944 SCRIBQ14160 1630 aa41.44■■■■■ 4.22
NIPSNAP1-206ENST00000496944 BICRAQ9NZM4 1560 aa41.23■■■■■ 4.19
NIPSNAP1-206ENST00000496944 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.17
NIPSNAP1-206ENST00000496944 SHROOM4Q9ULL8 1493 aa40.96■■■■■ 4.15
NIPSNAP1-206ENST00000496944 EIF4G1Q04637 1599 aaKnown RBP40.12■■■■■ 4.01
NIPSNAP1-206ENST00000496944 DNAJC5BQ9UF47 199 aa39.92■■■■□ 3.98
NIPSNAP1-206ENST00000496944 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
NIPSNAP1-206ENST00000496944 CECR2Q9BXF3 1484 aa39.83■■■■□ 3.97
NIPSNAP1-206ENST00000496944 BAZ1AQ9NRL2 1556 aaPredicted RBP39.75■■■■□ 3.95
NIPSNAP1-206ENST00000496944 SMARCA4P51532 1647 aa39.71■■■■□ 3.95
NIPSNAP1-206ENST00000496944 MROH2BQ7Z745 1585 aa39.49■■■■□ 3.91
NIPSNAP1-206ENST00000496944 SMARCA2P51531 1590 aa39.4■■■■□ 3.9
NIPSNAP1-206ENST00000496944 ATAD2BQ9ULI0 1458 aa39.37■■■■□ 3.89
NIPSNAP1-206ENST00000496944 PEG3Q9GZU2 1588 aa39.35■■■■□ 3.89
NIPSNAP1-206ENST00000496944 NCAPD3P42695 1498 aa39.31■■■■□ 3.88
NIPSNAP1-206ENST00000496944 RSF1Q96T23 1441 aaPredicted RBP39.19■■■■□ 3.86
NIPSNAP1-206ENST00000496944 HMGXB3Q12766 1538 aa39.19■■■■□ 3.86
NIPSNAP1-206ENST00000496944 BAZ1BQ9UIG0 1483 aaKnown RBP39.08■■■■□ 3.85
NIPSNAP1-206ENST00000496944 WIZO95785 1651 aa39.08■■■■□ 3.85
NIPSNAP1-206ENST00000496944 TOP2AP11388 1531 aaKnown RBP38.75■■■■□ 3.79
NIPSNAP1-206ENST00000496944 SUPT5HO00267 1087 aaKnown RBP38.43■■■■□ 3.74
NIPSNAP1-206ENST00000496944 CCDC88BA6NC98 1476 aa38.24■■■■□ 3.71
NIPSNAP1-206ENST00000496944 LAMC3Q9Y6N6 1575 aa38.23■■■■□ 3.71
NIPSNAP1-206ENST00000496944 CADPSQ9ULU8 1353 aa38.17■■■■□ 3.7
NIPSNAP1-206ENST00000496944 NESP48681 1621 aa38.16■■■■□ 3.7
NIPSNAP1-206ENST00000496944 CFTRP13569 1480 aa38.04■■■■□ 3.68
NIPSNAP1-206ENST00000496944 PDS5BQ9NTI5 1447 aa37.95■■■■□ 3.67
NIPSNAP1-206ENST00000496944 ERCC6Q03468 1493 aa37.91■■■■□ 3.66
NIPSNAP1-206ENST00000496944 PRDM2Q13029 1718 aa37.85■■■■□ 3.65
NIPSNAP1-206ENST00000496944 KIF21AQ7Z4S6 1674 aa37.78■■■■□ 3.64
NIPSNAP1-206ENST00000496944 FANCD2Q9BXW9 1451 aa37.73■■■■□ 3.63
NIPSNAP1-206ENST00000496944 CEP164Q9UPV0 1460 aa37.67■■■■□ 3.62
NIPSNAP1-206ENST00000496944 THOC2Q8NI27 1593 aaKnown RBP37.57■■■■□ 3.6
NIPSNAP1-206ENST00000496944 MRC2Q9UBG0 1479 aa37.53■■■■□ 3.6
NIPSNAP1-206ENST00000496944 CUX2O14529 1486 aa37.41■■■■□ 3.58
NIPSNAP1-206ENST00000496944 WDR62O43379 1518 aa37.4■■■■□ 3.58
NIPSNAP1-206ENST00000496944 URB2Q14146 1524 aaKnown RBP37.31■■■■□ 3.56
NIPSNAP1-206ENST00000496944 ABCC8Q09428 1581 aa37.26■■■■□ 3.56
NIPSNAP1-206ENST00000496944 DNMBPQ6XZF7 1577 aa37.21■■■■□ 3.55
NIPSNAP1-206ENST00000496944 TOPBP1Q92547 1522 aa37.17■■■■□ 3.54
NIPSNAP1-206ENST00000496944 CUX1P39880 1505 aa37.04■■■■□ 3.52
NIPSNAP1-206ENST00000496944 WRNQ14191 1432 aaPredicted RBP eCLIP36.96■■■■□ 3.51
NIPSNAP1-206ENST00000496944 POLA1P09884 1462 aaPredicted RBP36.88■■■■□ 3.5
NIPSNAP1-206ENST00000496944 TOP2BQ02880 1626 aa36.87■■■■□ 3.49
NIPSNAP1-206ENST00000496944 BIVM-ERCC5R4GMW8 1640 aa36.87■■■■□ 3.49
NIPSNAP1-206ENST00000496944 IFT140Q96RY7 1462 aa36.87■■■■□ 3.49
NIPSNAP1-206ENST00000496944 FGD5Q6ZNL6 1462 aa36.85■■■■□ 3.49
NIPSNAP1-206ENST00000496944 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
NIPSNAP1-206ENST00000496944 TARBP1Q13395 1621 aaKnown RBP36.75■■■■□ 3.47
NIPSNAP1-206ENST00000496944 SOGA1O94964 1423 aa36.74■■■■□ 3.47
NIPSNAP1-206ENST00000496944 RAD54L2Q9Y4B4 1467 aa36.67■■■■□ 3.46
NIPSNAP1-206ENST00000496944 ZNF608Q9ULD9 1512 aaPredicted RBP36.59■■■■□ 3.45
NIPSNAP1-206ENST00000496944 WDR97A6NE52 1622 aa36.57■■■■□ 3.44
NIPSNAP1-206ENST00000496944 ABCA10Q8WWZ4 1543 aa36.54■■■■□ 3.44
NIPSNAP1-206ENST00000496944 EIF4G3O43432 1585 aaKnown RBP36.53■■■■□ 3.44
NIPSNAP1-206ENST00000496944 AQRO60306 1485 aaKnown RBP eCLIP36.43■■■■□ 3.423e-9■■■■■ 37.6
NIPSNAP1-206ENST00000496944 TDRD9Q8NDG6 1382 aaKnown RBP36.43■■■■□ 3.42
NIPSNAP1-206ENST00000496944 ABCA5Q8WWZ7 1642 aa36.37■■■■□ 3.41
NIPSNAP1-206ENST00000496944 TRIM41Q8WV44 630 aa36.34■■■■□ 3.41
NIPSNAP1-206ENST00000496944 GAPVD1Q14C86 1478 aa36.33■■■■□ 3.41
NIPSNAP1-206ENST00000496944 GRIN2BQ13224 1484 aa36.29■■■■□ 3.4
NIPSNAP1-206ENST00000496944 PBRM1Q86U86 1689 aa36.25■■■■□ 3.39
NIPSNAP1-206ENST00000496944 KIF27Q86VH2 1401 aa36.18■■■■□ 3.38
NIPSNAP1-206ENST00000496944 MAGI1Q96QZ7 1491 aaPredicted RBP36.18■■■■□ 3.38
NIPSNAP1-206ENST00000496944 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
NIPSNAP1-206ENST00000496944 ERICH3Q5RHP9 1530 aa36.13■■■■□ 3.38
NIPSNAP1-206ENST00000496944 CHIC1Q5VXU3 224 aa36.13■■■■□ 3.37
NIPSNAP1-206ENST00000496944 SYNJ2O15056 1496 aa36■■■■□ 3.35
NIPSNAP1-206ENST00000496944 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
NIPSNAP1-206ENST00000496944 CHD1O14646 1710 aa35.98■■■■□ 3.35
NIPSNAP1-206ENST00000496944 FHAD1B1AJZ9 1412 aa35.94■■■■□ 3.34
NIPSNAP1-206ENST00000496944 IGF1RP08069 1367 aa35.93■■■■□ 3.34
NIPSNAP1-206ENST00000496944 CHMP7Q8WUX9 453 aaPredicted RBP35.91■■■■□ 3.34
NIPSNAP1-206ENST00000496944 CUL7Q14999 1698 aa35.91■■■■□ 3.34
NIPSNAP1-206ENST00000496944 FBLN2P98095 1184 aa35.9■■■■□ 3.34
NIPSNAP1-206ENST00000496944 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
NIPSNAP1-206ENST00000496944 RUSC2Q8N2Y8 1516 aa35.88■■■■□ 3.33
NIPSNAP1-206ENST00000496944 GRIN2AQ12879 1464 aa35.81■■■■□ 3.32
NIPSNAP1-206ENST00000496944 EEA1Q15075 1411 aa35.81■■■■□ 3.32
NIPSNAP1-206ENST00000496944 CARMIL1Q5VZK9 1371 aa35.75■■■■□ 3.31
NIPSNAP1-206ENST00000496944 DNAJC5Q9H3Z4 198 aa35.71■■■■□ 3.31
NIPSNAP1-206ENST00000496944 NUP160Q12769 1436 aa35.65■■■■□ 3.3
NIPSNAP1-206ENST00000496944 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
NIPSNAP1-206ENST00000496944 CSRNP3Q8WYN3 585 aa35.61■■■■□ 3.29
NIPSNAP1-206ENST00000496944 RAPGEF2Q9Y4G8 1499 aa35.6■■■■□ 3.29
NIPSNAP1-206ENST00000496944 CEP170Q5SW79 1584 aa35.59■■■■□ 3.29
NIPSNAP1-206ENST00000496944 PRXQ9BXM0 1461 aa35.58■■■■□ 3.29
NIPSNAP1-206ENST00000496944 FAM9AQ8IZU1 332 aaPredicted RBP35.49■■■■□ 3.27
NIPSNAP1-206ENST00000496944 KIAA0586Q9BVV6 1533 aa35.41■■■■□ 3.26
NIPSNAP1-206ENST00000496944 KIF21BO75037 1637 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms