RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-213ENST00000439732 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
SMARCA2-213ENST00000439732 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
SMARCA2-213ENST00000439732 ABCC9O60706 1549 aa19.65■□□□□ 0.74
SMARCA2-213ENST00000439732 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
SMARCA2-213ENST00000439732 NACADO15069 1562 aa18.99■□□□□ 0.63
SMARCA2-213ENST00000439732 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
SMARCA2-213ENST00000439732 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
SMARCA2-213ENST00000439732 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
SMARCA2-213ENST00000439732 DCAF1Q9Y4B6 1507 aa18.86■□□□□ 0.61
SMARCA2-213ENST00000439732 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
SMARCA2-213ENST00000439732 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
SMARCA2-213ENST00000439732 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
SMARCA2-213ENST00000439732 BICRAQ9NZM4 1560 aa18.33■□□□□ 0.52
SMARCA2-213ENST00000439732 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
SMARCA2-213ENST00000439732 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
SMARCA2-213ENST00000439732 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
SMARCA2-213ENST00000439732 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.44
SMARCA2-213ENST00000439732 CECR2Q9BXF3 1484 aa17.69■□□□□ 0.42
SMARCA2-213ENST00000439732 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
SMARCA2-213ENST00000439732 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
SMARCA2-213ENST00000439732 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
SMARCA2-213ENST00000439732 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
SMARCA2-213ENST00000439732 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
SMARCA2-213ENST00000439732 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SMARCA2-213ENST00000439732 PEG3Q9GZU2 1588 aa17.45■□□□□ 0.38
SMARCA2-213ENST00000439732 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
SMARCA2-213ENST00000439732 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
SMARCA2-213ENST00000439732 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
SMARCA2-213ENST00000439732 WIZO95785 1651 aa17.32■□□□□ 0.36
SMARCA2-213ENST00000439732 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
SMARCA2-213ENST00000439732 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
SMARCA2-213ENST00000439732 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
SMARCA2-213ENST00000439732 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
SMARCA2-213ENST00000439732 NESP48681 1621 aa17■□□□□ 0.31
SMARCA2-213ENST00000439732 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
SMARCA2-213ENST00000439732 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
SMARCA2-213ENST00000439732 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
SMARCA2-213ENST00000439732 CFTRP13569 1480 aa16.93■□□□□ 0.3
SMARCA2-213ENST00000439732 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
SMARCA2-213ENST00000439732 KIF21AQ7Z4S6 1674 aa16.8■□□□□ 0.28
SMARCA2-213ENST00000439732 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
SMARCA2-213ENST00000439732 PRDM2Q13029 1718 aa16.76■□□□□ 0.27
SMARCA2-213ENST00000439732 CUX2O14529 1486 aa16.75■□□□□ 0.27
SMARCA2-213ENST00000439732 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
SMARCA2-213ENST00000439732 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
SMARCA2-213ENST00000439732 WDR62O43379 1518 aa16.64■□□□□ 0.25
SMARCA2-213ENST00000439732 ABCC8Q09428 1581 aa16.62■□□□□ 0.25
SMARCA2-213ENST00000439732 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
SMARCA2-213ENST00000439732 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
SMARCA2-213ENST00000439732 DNMBPQ6XZF7 1577 aa16.52■□□□□ 0.24
SMARCA2-213ENST00000439732 IFT140Q96RY7 1462 aa16.44■□□□□ 0.22
SMARCA2-213ENST00000439732 CUX1P39880 1505 aa16.42■□□□□ 0.22
SMARCA2-213ENST00000439732 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
SMARCA2-213ENST00000439732 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
SMARCA2-213ENST00000439732 SOGA1O94964 1423 aa16.38■□□□□ 0.21
SMARCA2-213ENST00000439732 FGD5Q6ZNL6 1462 aa16.36■□□□□ 0.21
SMARCA2-213ENST00000439732 TOP2BQ02880 1626 aa16.33■□□□□ 0.2
SMARCA2-213ENST00000439732 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
SMARCA2-213ENST00000439732 RAD54L2Q9Y4B4 1467 aa16.32■□□□□ 0.2
SMARCA2-213ENST00000439732 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
SMARCA2-213ENST00000439732 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
SMARCA2-213ENST00000439732 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
SMARCA2-213ENST00000439732 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMARCA2-213ENST00000439732 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
SMARCA2-213ENST00000439732 WDR97A6NE52 1622 aa16.25■□□□□ 0.19
SMARCA2-213ENST00000439732 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
SMARCA2-213ENST00000439732 EIF4G3O43432 1585 aaKnown RBP16.22■□□□□ 0.19
SMARCA2-213ENST00000439732 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
SMARCA2-213ENST00000439732 DNAJC5Q9H3Z4 198 aa16.18■□□□□ 0.18
SMARCA2-213ENST00000439732 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
SMARCA2-213ENST00000439732 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
SMARCA2-213ENST00000439732 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
SMARCA2-213ENST00000439732 FBLN2P98095 1184 aa16.12■□□□□ 0.17
SMARCA2-213ENST00000439732 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-213ENST00000439732 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
SMARCA2-213ENST00000439732 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
SMARCA2-213ENST00000439732 KIF27Q86VH2 1401 aa16.09■□□□□ 0.17
SMARCA2-213ENST00000439732 SNAPC4Q5SXM2 1469 aa16.09■□□□□ 0.17
SMARCA2-213ENST00000439732 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
SMARCA2-213ENST00000439732 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
SMARCA2-213ENST00000439732 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
SMARCA2-213ENST00000439732 CHD1O14646 1710 aa16.01■□□□□ 0.15
SMARCA2-213ENST00000439732 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
SMARCA2-213ENST00000439732 IGF1RP08069 1367 aa16■□□□□ 0.15
SMARCA2-213ENST00000439732 CHIC1Q5VXU3 224 aa15.98■□□□□ 0.15
SMARCA2-213ENST00000439732 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
SMARCA2-213ENST00000439732 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
SMARCA2-213ENST00000439732 CARMIL1Q5VZK9 1371 aa15.92■□□□□ 0.14
SMARCA2-213ENST00000439732 CUL7Q14999 1698 aa15.91■□□□□ 0.14
SMARCA2-213ENST00000439732 RUSC2Q8N2Y8 1516 aa15.88■□□□□ 0.13
SMARCA2-213ENST00000439732 EEA1Q15075 1411 aa15.86■□□□□ 0.13
SMARCA2-213ENST00000439732 NUP160Q12769 1436 aa15.85■□□□□ 0.13
SMARCA2-213ENST00000439732 CSRNP3Q8WYN3 585 aa15.85■□□□□ 0.13
SMARCA2-213ENST00000439732 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
SMARCA2-213ENST00000439732 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
SMARCA2-213ENST00000439732 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
SMARCA2-213ENST00000439732 JPH4Q96JJ6 628 aa15.78■□□□□ 0.12
SMARCA2-213ENST00000439732 ARHGEF11O15085 1522 aa15.78■□□□□ 0.12
SMARCA2-213ENST00000439732 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
SMARCA2-213ENST00000439732 RIMBP3CA6NJZ7 1639 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms